RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 GDF15Q99988 308 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 ANKRD2Q9GZV1 360 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 MTMR10Q9NXD2 777 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 STAP2Q9UGK3 403 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 RIPOR2Q9Y4F9 1068 aa4.73□□□□□ -1.65
RBM39-220ENST00000455343 ADGRA2Q96PE1 1338 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 SNAP23O00161 211 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 SGPL1O95470 568 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 PGRP06401 933 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 CSF1RP07333 972 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 ZNF853P0CG23 659 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 CCL5P13501 91 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 TFE3P19532 575 aaPredicted RBP4.72□□□□□ -1.65
RBM39-220ENST00000455343 CYP7A1P22680 504 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 GDNFP39905 211 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 PSMC4P43686 418 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 CHRNDQ07001 517 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 TNK2Q07912 1038 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 TNFAIP1Q13829 316 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 KIF22Q14807 665 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 SPOCD1Q6ZMY3 1216 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 DEFB123Q8N688 67 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 U2AF1L4Q8WU68 220 aaKnown RBP4.72□□□□□ -1.65
RBM39-220ENST00000455343 TMEM87BQ96K49 555 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 ALPK1Q96QP1 1244 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 DPH2Q9BQC3 489 aaPredicted RBP4.72□□□□□ -1.65
RBM39-220ENST00000455343 PLA2G12BQ9BX93 195 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 MIR1-1HGQ9H1L0 117 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 VEZTQ9HBM0 779 aa4.72□□□□□ -1.65
RBM39-220ENST00000455343 ZNF70Q9UC06 446 aaPredicted RBP4.72□□□□□ -1.65
RBM39-220ENST00000455343 ANKRD33BA6NCL7 494 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 F8W031 263 aaPredicted RBP4.71□□□□□ -1.66
RBM39-220ENST00000455343 WDHD1O75717 1129 aaPredicted RBP4.71□□□□□ -1.66
RBM39-220ENST00000455343 CETPP11597 493 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 HOXD10P28358 340 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 IGHMBP2P38935 993 aaKnown RBP4.71□□□□□ -1.66
RBM39-220ENST00000455343 CASP7P55210 303 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 PPATQ06203 517 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 PPIL2Q13356 520 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 MOGSQ13724 837 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 TMEM67Q5HYA8 995 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 SLC6A19Q695T7 634 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 Q7L0L9 218 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 CDH24Q86UP0 819 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 ERO1BQ86YB8 467 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 CILP2Q8IUL8 1156 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 DNAJB8Q8NHS0 232 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 UBE2FQ969M7 185 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 CCDC120Q96HB5 630 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 TMEM39BQ9GZU3 492 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 TDRD3Q9H7E2 651 aaKnown RBP4.71□□□□□ -1.66
RBM39-220ENST00000455343 PRUNE2Q8WUY3 3088 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 FAM205AQ6ZU69 1335 aa4.71□□□□□ -1.66
RBM39-220ENST00000455343 LAMB1P07942 1786 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ZNF646O15015 1829 aaPredicted RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 PSME4Q14997 1843 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 PI4KAP2A4QPH2 592 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 DDX58O95786 925 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 TSPAN15O95858 294 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ESR1P03372 595 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 RLBP1P12271 317 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ETV3P41162 512 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ST13P50502 369 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 UBXN2AP68543 259 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 RPL6Q02878 288 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 PRKCZQ05513 592 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 PDE4BQ07343 736 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 SNAPC2Q13487 334 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 TSNAXIP1Q2TAA8 658 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 MPZL3Q6UWV2 235 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 KSR2Q6VAB6 950 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 PRR23BQ6ZRT6 265 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 SND1Q7KZF4 910 aaKnown RBP eCLIP4.7□□□□□ -1.66
RBM39-220ENST00000455343 ANKRD23Q86SG2 305 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 MCATQ8IVS2 390 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 PI4KAP1Q8N8J0 262 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 TDRD7Q8NHU6 1098 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 PIWIL2Q8TC59 973 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 RAET1EQ8TD07 263 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ACSF2Q96CM8 615 aaPredicted RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 Q96M66 194 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 MPHOSPH8Q99549 860 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 NOC4LQ9BVI4 516 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 SLAMF8Q9P0V8 285 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ZSWIM5Q9P217 1185 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 CPA4Q9UI42 421 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 ADAM30Q9UKF2 790 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 TLR6Q9Y2C9 796 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 MAP3K2Q9Y2U5 619 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 LAS1LQ9Y4W2 734 aaKnown RBP4.7□□□□□ -1.66
RBM39-220ENST00000455343 MYPNQ86TC9 1320 aa4.7□□□□□ -1.66
RBM39-220ENST00000455343 TCP10L2B9ZVM9 353 aa4.69□□□□□ -1.66
RBM39-220ENST00000455343 PDHXO00330 501 aa4.69□□□□□ -1.66
RBM39-220ENST00000455343 TAF5LO75529 589 aa4.69□□□□□ -1.66
RBM39-220ENST00000455343 TNNI2P48788 182 aa4.69□□□□□ -1.66
RBM39-220ENST00000455343 RBM5P52756 815 aaKnown RBP eCLIP4.69□□□□□ -1.66
RBM39-220ENST00000455343 DAB2P98082 770 aa4.69□□□□□ -1.66
RBM39-220ENST00000455343 HDLBPQ00341 1268 aaKnown RBP4.69□□□□□ -1.66
RBM39-220ENST00000455343 GCKRQ14397 625 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms