RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 NLRP5P59047 1200 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 TAP1Q03518 808 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 PLEKHG4Q58EX7 1191 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 FAM26DQ5JW98 314 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
LMCD1-205ENST00000454244 PPM1EQ8WY54 764 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 SEPT8Q92599 483 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
LMCD1-205ENST00000454244 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
LMCD1-205ENST00000454244 LCHNA4D1U4 455 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 MBLAC1A4D2B0 266 aaPredicted RBP12.24□□□□□ -0.45
LMCD1-205ENST00000454244 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 RFXAPO00287 272 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 DLL1O00548 723 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 DHX15O43143 795 aaKnown RBP12.24□□□□□ -0.45
LMCD1-205ENST00000454244 ATG7O95352 703 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 PRR16Q569H4 304 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 MARCH8Q5T0T0 291 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 FAM117BQ6P1L5 589 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
LMCD1-205ENST00000454244 PLPPR4Q7Z2D5 763 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 ZBTB10Q96DT7 871 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 ZNF577Q9BSK1 485 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 DOCK5Q9H7D0 1870 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 SH3GLB2Q9NR46 395 aa12.24□□□□□ -0.45
LMCD1-205ENST00000454244 EPOPA6NHQ4 379 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 IPO5O00410 1097 aaKnown RBP12.23□□□□□ -0.45
LMCD1-205ENST00000454244 BACH1O14867 736 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 GJB5O95377 273 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 DEXIO95424 95 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 CHRNA1P02708 482 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 AMHP03971 560 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 GHRP10912 638 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 CIITAP33076 1130 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 SETQ01105 290 aaPredicted RBP12.23□□□□□ -0.45
LMCD1-205ENST00000454244 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
LMCD1-205ENST00000454244 CCDC85BQ15834 202 aaPredicted RBP12.23□□□□□ -0.45
LMCD1-205ENST00000454244 ABHD15Q6UXT9 468 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 SPRED2Q7Z698 418 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 RSPH3Q86UC2 560 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 MYOCDQ8IZQ8 938 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 DNAJB3Q8WWF6 145 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 ARNTL2Q8WYA1 636 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
LMCD1-205ENST00000454244 AIFM3Q96NN9 605 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 RAD9AQ99638 391 aa12.23□□□□□ -0.45
LMCD1-205ENST00000454244 FAM49AQ9H0Q0 323 aaPredicted RBP12.23□□□□□ -0.45
LMCD1-205ENST00000454244 IGKV6D-21A0A0A0MT36 114 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 EDIL3O43854 480 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 ANAPC15P60006 121 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 MGAT3Q09327 533 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 SCRN1Q12765 414 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 MIS18BP1Q6P0N0 1132 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 PDXDC2PQ6P474 469 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 CCDC60Q8IWA6 550 aaPredicted RBP12.22□□□□□ -0.45
LMCD1-205ENST00000454244 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 IFIH1Q9BYX4 1025 aaKnown RBP12.22□□□□□ -0.45
LMCD1-205ENST00000454244 SLKQ9H2G2 1235 aaPredicted RBP12.22□□□□□ -0.45
LMCD1-205ENST00000454244 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 ZNF302Q9NR11 478 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 TBC1D22BQ9NU19 505 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 TPCN1Q9ULQ1 816 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 PCDHA4Q9UN74 947 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 CDY2AQ9Y6F7 541 aa12.22□□□□□ -0.45
LMCD1-205ENST00000454244 HBP1O60381 514 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 DTNBO60941 627 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 CDKL5O76039 1030 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 SLC26A2P50443 739 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 AK2P54819 239 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 MRPS6P82932 125 aaKnown RBP12.21□□□□□ -0.45
LMCD1-205ENST00000454244 LPIN1Q14693 890 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 ZNF746Q6NUN9 644 aaPredicted RBP12.21□□□□□ -0.45
LMCD1-205ENST00000454244 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 BLIDQ8IZY5 108 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 ATP8B4Q8TF62 1192 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 APBB2Q92870 758 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 LENG9Q96B70 501 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 TCEAL9Q9UHQ7 104 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 PCDHA2Q9Y5H9 948 aa12.21□□□□□ -0.45
LMCD1-205ENST00000454244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
LMCD1-205ENST00000454244 LINC01553A4QN01 128 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 MSH4O15457 936 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
LMCD1-205ENST00000454244 PFKFB2O60825 505 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 UPP2O95045 317 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 RPLP2P05387 115 aaKnown RBP12.2□□□□□ -0.46
LMCD1-205ENST00000454244 USP11P51784 963 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 KRT76Q01546 638 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 TMEM62Q0P6H9 643 aa12.2□□□□□ -0.46
LMCD1-205ENST00000454244 NPY5RQ15761 445 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms