RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 IER5Q5VY09 327 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 RNF135Q8IUD6 432 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 NPAS4Q8IUM7 802 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 EFHBQ8N7U6 833 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 RUFY2Q8WXA3 655 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 RRP36Q96EU6 259 aaKnown RBP16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 MSLNLQ96KJ4 702 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 SEC63Q9UGP8 760 aaKnown RBP16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 KAT6AQ92794 2004 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 M0QZ92 97 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 DDAH1O94760 285 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 NDUFV1P49821 464 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 COASYQ13057 564 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 CRIPAKQ8N1N5 446 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 SMRP1Q8NCR6 262 aa16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
LYSMD3-202ENST00000453259 MEIS2O14770 477 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 KCNA2P16389 499 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 GNAQP50148 359 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 PTPN5P54829 565 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 UBE3AQ05086 875 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 DLX2Q07687 328 aaPredicted RBP16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 GLG1Q92896 1179 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 MUTYHQ9UIF7 546 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
LYSMD3-202ENST00000453259 CYP21A2P08686 494 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 SP4Q02446 784 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 MTMR1Q13613 665 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 CAMK1Q14012 370 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 CBX2Q14781 532 aaPredicted RBP16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 MARCH8Q5T0T0 291 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 DNAJB3Q8WWF6 145 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 IRF2BPLQ9H1B7 796 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 IGSF9BQ9UPX0 1349 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
LYSMD3-202ENST00000453259 GSTTP1A0A1W2PQM5 241 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 LOC730098B7Z3J9 87 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 SLC26A2P50443 739 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 PDE12Q6L8Q7 609 aaKnown RBP16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 SUGP1Q8IWZ8 645 aaKnown RBP16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 NME8Q8N427 588 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 SPPL3Q8TCT6 385 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 CDCA3Q99618 268 aaPredicted RBP16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 PSTPIP2Q9H939 334 aa16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 ALG13Q9NP73 1137 aaKnown RBP16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 MRPL42Q9Y6G3 142 aaKnown RBP16.4■□□□□ 0.22
LYSMD3-202ENST00000453259 DOCK5Q9H7D0 1870 aa16.39■□□□□ 0.22
LYSMD3-202ENST00000453259 MYO7AQ13402 2215 aa16.39■□□□□ 0.22
LYSMD3-202ENST00000453259 E7EWF7 191 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 ITGB1P05556 798 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 SCG2P13521 617 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 ATF7P17544 494 aaPredicted RBP16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 PAK2Q13177 524 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 CLUL1Q15846 466 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 ODR4Q5SWX8 454 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 IGFLR1Q9H665 355 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 JPH1Q9HDC5 661 aaPredicted RBP16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 AAASQ9NRG9 546 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 PCDHA2Q9Y5H9 948 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 TRPV2Q9Y5S1 764 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 UBIAD1Q9Y5Z9 338 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 WDFY4Q6ZS81 3184 aa16.39■□□□□ 0.21
LYSMD3-202ENST00000453259 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 M0R296 226 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 SRGAP2BP0DMP2 458 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 CALM1P0DP23 149 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 CALM2P0DP24 149 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 CALM3P0DP25 149 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 ITGB5P18084 799 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 CD52P31358 61 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 NUBP1P53384 320 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 ZNF654Q8IZM8 581 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 KLHL23Q8NBE8 558 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 IGDCC4Q8TDY8 1250 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 LINC01599Q8WXQ3 324 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 PBXIP1Q96AQ6 731 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 PHF7Q9BWX1 381 aaPredicted RBP16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 AGO3Q9H9G7 860 aaKnown RBP16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 JADE2Q9NQC1 790 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 CLEC1BQ9P126 229 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 PCDHB12Q9Y5F1 795 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 TECTAO75443 2155 aa16.38■□□□□ 0.21
LYSMD3-202ENST00000453259 TRIOO75962 3097 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms