RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 FAM217BQ9NTX9 383 aaPredicted RBP24.61■■□□□ 1.53
C9orf3-208ENST00000451893 NFASCO94856 1347 aa24.61■■□□□ 1.53
C9orf3-208ENST00000451893 M0QZ92 97 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 BACH1O14867 736 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 SREBF1P36956 1147 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 TCTN1Q2MV58 587 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.6■■□□□ 1.53
C9orf3-208ENST00000451893 PLA2G4DQ86XP0 818 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 HSCBQ8IWL3 235 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 REXO1Q8N1G1 1221 aaKnown RBP24.6■■□□□ 1.53
C9orf3-208ENST00000451893 CYP2W1Q8TAV3 490 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 BICD2Q8TD16 824 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 ATXN2LQ8WWM7 1075 aaKnown RBP24.6■■□□□ 1.53
C9orf3-208ENST00000451893 PHKBQ93100 1093 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 SLC26A6Q9BXS9 759 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 IFIH1Q9BYX4 1025 aaKnown RBP24.6■■□□□ 1.53
C9orf3-208ENST00000451893 INSL6Q9Y581 213 aa24.6■■□□□ 1.53
C9orf3-208ENST00000451893 LCHNA4D1U4 455 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 RRN3P2A6NIE6 340 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 PRPF3O43395 683 aaKnown RBP24.59■■□□□ 1.53
C9orf3-208ENST00000451893 UPP2O95045 317 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 ARP10275 920 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 MCM2P49736 904 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 ACTR2P61160 394 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 CCT2P78371 535 aaKnown RBP24.59■■□□□ 1.53
C9orf3-208ENST00000451893 TRIM22Q8IYM9 498 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 TGS1Q96RS0 853 aaKnown RBP24.59■■□□□ 1.53
C9orf3-208ENST00000451893 YME1L1Q96TA2 773 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 AGO4Q9HCK5 861 aaKnown RBP24.59■■□□□ 1.53
C9orf3-208ENST00000451893 CYP46A1Q9Y6A2 500 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 UNC80Q8N2C7 3258 aa24.59■■□□□ 1.53
C9orf3-208ENST00000451893 CPLX1O14810 134 aa24.58■■□□□ 1.53
C9orf3-208ENST00000451893 RPLP2P05387 115 aaKnown RBP24.58■■□□□ 1.53
C9orf3-208ENST00000451893 STAT5BP51692 787 aa24.58■■□□□ 1.53
C9orf3-208ENST00000451893 MRPS5P82675 430 aaKnown RBP24.58■■□□□ 1.53
C9orf3-208ENST00000451893 FAM160B1Q5W0V3 765 aa24.58■■□□□ 1.53
C9orf3-208ENST00000451893 FAM49AQ9H0Q0 323 aaPredicted RBP24.58■■□□□ 1.53
C9orf3-208ENST00000451893 EYSQ5T1H1 3165 aa24.58■■□□□ 1.52
C9orf3-208ENST00000451893 ESYT2A0FGR8 921 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 PPFIA3O75145 1194 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 GHRP10912 638 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 CLK2P49760 499 aaKnown RBP24.57■■□□□ 1.52
C9orf3-208ENST00000451893 SETQ01105 290 aaPredicted RBP24.57■■□□□ 1.52
C9orf3-208ENST00000451893 RUFY4Q6ZNE9 571 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 RUFY3Q7L099 469 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 DNAJB3Q8WWF6 145 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 RNF26Q9BY78 433 aaPredicted RBP24.57■■□□□ 1.52
C9orf3-208ENST00000451893 MTCH2Q9Y6C9 303 aa24.57■■□□□ 1.52
C9orf3-208ENST00000451893 COL4A4P53420 1690 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-208ENST00000451893 EPOPA6NHQ4 379 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 MEIS1O00470 390 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 ARHGEF15O94989 841 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 INSRRP14616 1297 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 ADAM17P78536 824 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 GRB10Q13322 594 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 AAK1Q2M2I8 961 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 CPLX2Q6PUV4 134 aaKnown RBP24.56■■□□□ 1.52
C9orf3-208ENST00000451893 NIPA1Q7RTP0 329 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 CKAP2LQ8IYA6 745 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 GDPD5Q8WTR4 605 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 ZNF577Q9BSK1 485 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 ZMYND12Q9H0C1 365 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 SIP14410 1827 aa24.56■■□□□ 1.52
C9orf3-208ENST00000451893 NID2Q14112 1375 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 FAM26DQ5JW98 314 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 IER5Q5VY09 327 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 MIS18BP1Q6P0N0 1132 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 PLPPR4Q7Z2D5 763 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 FBXL16Q8N461 479 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 CDY2AQ9Y6F7 541 aa24.55■■□□□ 1.52
C9orf3-208ENST00000451893 PRRC2BQ5JSZ5 2229 aaKnown RBP24.54■■□□□ 1.52
C9orf3-208ENST00000451893 POTEB3A0JP26 581 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 LINC01553A4QN01 128 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 SLC26A2P50443 739 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 NLRP5P59047 1200 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 SSRP1Q08945 709 aaKnown RBP24.54■■□□□ 1.52
C9orf3-208ENST00000451893 ITGB3BPQ13352 177 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-208ENST00000451893 POTEBQ6S5H4 581 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 ASB2Q96Q27 587 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 UIMC1Q96RL1 719 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 NCOA5Q9HCD5 579 aaKnown RBP24.54■■□□□ 1.52
C9orf3-208ENST00000451893 SAMM50Q9Y512 469 aa24.54■■□□□ 1.52
C9orf3-208ENST00000451893 MYH9P35579 1960 aaKnown RBP24.53■■□□□ 1.52
C9orf3-208ENST00000451893 CUL9Q8IWT3 2517 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 IPO5O00410 1097 aaKnown RBP24.53■■□□□ 1.52
C9orf3-208ENST00000451893 CHRNA1P02708 482 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 PDIA3P30101 505 aaKnown RBP24.53■■□□□ 1.52
C9orf3-208ENST00000451893 NEK4P51957 841 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 MRPS6P82932 125 aaKnown RBP24.53■■□□□ 1.52
C9orf3-208ENST00000451893 PLCB4Q15147 1175 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 KRT40Q6A162 431 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 RPAINQ86UA6 219 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 FBXO22Q8NEZ5 403 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 PCYT2Q99447 389 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 AGXT2Q9BYV1 514 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 ZNF302Q9NR11 478 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 VPS54Q9P1Q0 977 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 A0A0C4DFX4 3053 aa24.53■■□□□ 1.52
C9orf3-208ENST00000451893 MBLAC1A4D2B0 266 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-208ENST00000451893 FAM86B1E9PN63 330 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms