RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 FIGNQ5HY92 759 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 THEMIS2Q5TEJ8 643 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 ALKBH5Q6P6C2 394 aaKnown RBP15.31■□□□□ 0.04
CHFR-205ENST00000450056 TRPM8Q7Z2W7 1104 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 MYOCDQ8IZQ8 938 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 TBCKQ8TEA7 893 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 LARP4BQ92615 738 aaKnown RBP15.31■□□□□ 0.04
CHFR-205ENST00000450056 MTFR1LQ9H019 292 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 ECT2Q9H8V3 914 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 TFCP2L1Q9NZI6 479 aa15.31■□□□□ 0.04
CHFR-205ENST00000450056 CPSF2Q9P2I0 782 aaKnown RBP15.31■□□□□ 0.04
CHFR-205ENST00000450056 F8W031 263 aaPredicted RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 H0Y3Z8 333 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 TSPY3P0CV98 308 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 TSPY8P0CW00 308 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 TNNI2P48788 182 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 PTK2Q05397 1052 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 XRCC4Q13426 336 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 HGSNATQ68CP4 663 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 BICDL1Q6ZP65 573 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 HOOK3Q86VS8 718 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 MREGQ8N565 214 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 PTPN22Q9Y2R2 807 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 COL4A3BPQ9Y5P4 624 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 FGFR4P22455 802 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 CHRNDQ07001 517 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 BYSLQ13895 437 aaKnown RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 TAF11Q15544 211 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 NUGGCQ68CJ6 796 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 SLC44A5Q8NCS7 719 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■■■ 115.9
CHFR-205ENST00000450056 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 C15orf41Q9Y2V0 281 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 LAMB4A4D0S4 1761 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 LRIG3Q6UXM1 1119 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 BZW1Q7L1Q6 419 aaKnown RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 SAP30BPQ9UHR5 308 aaKnown RBP15.3■□□□□ 0.04
CHFR-205ENST00000450056 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
CHFR-205ENST00000450056 SSU72P8A0A1W2PR75 194 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 ALDH5A1P51649 535 aaPredicted RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 TMEM266Q2M3C6 531 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 CENPPQ6IPU0 288 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 TMED8Q6PL24 325 aaPredicted RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 ZNF572Q7Z3I7 529 aaPredicted RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 TMC3Q7Z5M5 1100 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 ZMYND12Q9H0C1 365 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 FGFR1OP2Q9NVK5 253 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.29■□□□□ 0.042e-7■■■■□ 26
CHFR-205ENST00000450056 CEP72Q9P209 647 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 FOXO6A8MYZ6 492 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 F8VZ95 297 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 PJA2O43164 708 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 SLC9A1P19634 815 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 BRD2P25440 801 aaKnown RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 SESN3P58005 492 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 LACTBP83111 547 aaPredicted RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 SNX1Q13596 522 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 SLC29A2Q14542 456 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 CALCRLQ16602 461 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 CAVIN4Q5BKX8 364 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 ERICH1Q86X53 443 aa15.29■□□□□ 0.04
CHFR-205ENST00000450056 ZNF444Q8N0Y2 327 aaPredicted RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.044e-6■■■■□ 25.1
CHFR-205ENST00000450056 NSRP1Q9H0G5 558 aaKnown RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
CHFR-205ENST00000450056 NPHP3-ACAD11A0A0J9YXS1 232 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 MGRN1O60291 552 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 RCAN1P53805 252 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 CRNKL1Q9BZJ0 848 aaKnown RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 SEC63Q9UGP8 760 aaKnown RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 AGAP1Q9UPQ3 857 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 NR2E1Q9Y466 385 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 TOGARAM1Q9Y4F4 1720 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 IRX1P78414 480 aaPredicted RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 ADAM9Q13443 819 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 EPS8L3Q8TE67 593 aaKnown RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 HOOK2Q96ED9 719 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 C7orf25Q9BPX7 421 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 KDM4CQ9H3R0 1056 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 TCP11X1B4DZS4 312 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 H0YGN5 161 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 HNRNPH3P31942 346 aaKnown RBP15.28■□□□□ 0.04
CHFR-205ENST00000450056 ATP11AP98196 1134 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 ARMC9Q7Z3E5 817 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 NEK8Q86SG6 692 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 PPP1R12CQ9BZL4 782 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 FAM129AQ9BZQ8 928 aa15.28■□□□□ 0.04
CHFR-205ENST00000450056 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms