RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ATP9AO75110 1047 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 PPFIA3O75145 1194 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 CYP21A2P08686 494 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 TROAPQ12815 778 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 NCOA7Q8NI08 942 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 EDAQ92838 391 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 PBXIP1Q96AQ6 731 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 ZBTB10Q96DT7 871 aa20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 MRPL42Q9Y6G3 142 aaKnown RBP20.72■□□□□ 0.91
CHCHD3-203ENST00000448878 MRPS6P82932 125 aaKnown RBP20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 TMEM62Q0P6H9 643 aa20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 IER5Q5VY09 327 aa20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 CTCFLQ8NI51 663 aaPredicted RBP20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 MICAL1Q8TDZ2 1067 aa20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 CDHR1Q96JP9 859 aa20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 SMARCAD1Q9H4L7 1026 aa20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 AGO3Q9H9G7 860 aaKnown RBP20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 RC3H2Q9HBD1 1191 aaKnown RBP20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 LRFN2Q9ULH4 789 aa20.71■□□□□ 0.91
CHCHD3-203ENST00000448878 ATG2AQ2TAZ0 1938 aa20.7■□□□□ 0.91
CHCHD3-203ENST00000448878 MYO7AQ13402 2215 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 GSTTP1A0A1W2PQM5 241 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 MEIS2O14770 477 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 ITGB1P05556 798 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 STAG3L1P0CL83 205 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 NRIP1P48552 1158 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 SPOUT1Q5T280 376 aaKnown RBP20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 ADGRD2Q7Z7M1 963 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 KLHL23Q8NBE8 558 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 SPPL3Q8TCT6 385 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 POF1BQ8WVV4 589 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 P2RX5Q93086 422 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 GPRASP2Q96D09 838 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 MYL10Q9BUA6 226 aa20.7■□□□□ 0.9
CHCHD3-203ENST00000448878 C5orf42Q9H799 3197 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 E7EWF7 191 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 KCNA2P16389 499 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 DNAJB1P25685 340 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 PTH1RQ03431 593 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 MTMR1Q13613 665 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 AAMPQ13685 434 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 CAMK1Q14012 370 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 MARCH8Q5T0T0 291 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 NPAS4Q8IUM7 802 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 SUGP1Q8IWZ8 645 aaKnown RBP20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 CMTR2Q8IYT2 770 aaKnown RBP20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 RUFY2Q8WXA3 655 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 FTHL17Q9BXU8 183 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 PSTPIP2Q9H939 334 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 TRPC6Q9Y210 931 aa20.69■□□□□ 0.9
CHCHD3-203ENST00000448878 TMEM221A6NGB7 291 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 RRN3P2A6NIE6 340 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 M0R296 226 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 PIK3CDO00329 1044 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 INSRRP14616 1297 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 KIF5BP33176 963 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 NAALADL2Q58DX5 795 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 TRIM67Q6ZTA4 783 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 RTN4RL1Q86UN2 441 aaPredicted RBP20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 LINC01599Q8WXQ3 324 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 MSLNLQ96KJ4 702 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 PHOX2BQ99453 314 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 AZI2Q9H6S1 392 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 BARX2Q9UMQ3 279 aaPredicted RBP20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 TRPV2Q9Y5S1 764 aa20.68■□□□□ 0.9
CHCHD3-203ENST00000448878 MBLAC1A4D2B0 266 aaPredicted RBP20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 ITGB5P18084 799 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 PAK2Q13177 524 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 NFXL1Q6ZNB6 911 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 EFHBQ8N7U6 833 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 TNPO1Q92973 898 aaKnown RBP20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 RPGRIP1Q96KN7 1286 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 SPZ1Q9BXG8 430 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 TLE6Q9H808 572 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 CLEC1BQ9P126 229 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 PADI3Q9ULW8 664 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 WDFY4Q6ZS81 3184 aa20.67■□□□□ 0.9
CHCHD3-203ENST00000448878 SPDYE3A6NKU9 549 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 EYA4O95677 639 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 RPLP2P05387 115 aaKnown RBP20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 SCG2P13521 617 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 GATMP50440 423 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 NFX1Q12986 1120 aaKnown RBP20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 UBE2SQ16763 222 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 IER5LQ5T953 404 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 ZNF654Q8IZM8 581 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 CMTR1Q8N1G2 835 aaKnown RBP20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 IGDCC4Q8TDY8 1250 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 GINS2Q9Y248 185 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 PCDHGC5Q9Y5F6 944 aa20.66■□□□□ 0.9
CHCHD3-203ENST00000448878 PER2O15055 1255 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 PTPN5P54829 565 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 ZXDAP98168 799 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 CASC1Q6TDU7 716 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 BMP8AQ7Z5Y6 402 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 PRSS33Q8NF86 280 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 TRAPPC12Q8WVT3 735 aa20.65■□□□□ 0.9
CHCHD3-203ENST00000448878 USP15Q9Y4E8 981 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms