RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 SRRM3A6NNA2 597 aaPredicted RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 PGRMC1O00264 195 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 CAND2O75155 1236 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 SHBGP04278 402 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 RPAINQ86UA6 219 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 SLC51AQ86UW1 340 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 TXNRD3Q86VQ6 643 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 ZNF444Q8N0Y2 327 aaPredicted RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 LRRC57Q8N9N7 239 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 COA7Q96BR5 231 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 GANQ9H2C0 597 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 PANK4Q9NVE7 773 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 STK17AQ9UEE5 414 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 C5orf60A6NFR6 353 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 IFFO1Q0D2I5 559 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 HIBCHQ6NVY1 386 aaPredicted RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 REXO1Q8N1G1 1221 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 DNAJC19Q96DA6 116 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 RIC8AQ9NPQ8 531 aa22.37■■□□□ 1.17
SMARCD2-203ENST00000448276 F8VZ95 297 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 KIF1CO43896 1103 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 EPS15P42566 896 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 PPP1R7Q15435 360 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 BICDL1Q6ZP65 573 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 FBXO33Q7Z6M2 555 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.36■■□□□ 1.178e-10■■■■□ 26.7
SMARCD2-203ENST00000448276 MTFR1LQ9H019 292 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 NUCKS1Q9H1E3 243 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 CTNND1O60716 968 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 TRIM59Q8IWR1 403 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 ACTRT1Q8TDG2 376 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 PSMD1Q99460 953 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 AIPL1Q9NZN9 384 aa22.36■■□□□ 1.17
SMARCD2-203ENST00000448276 ITGB4P16144 1822 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 GNA11P29992 359 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 CLNS1AP54105 237 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 ELF3P78545 371 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 DIXDC1Q155Q3 683 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 FAM26FQ5R3K3 315 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 UBAP2Q5T6F2 1119 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 AGBL2Q5U5Z8 902 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 SMIM5Q71RC9 77 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 IRF2BP2Q7Z5L9 587 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 DZIP1Q86YF9 867 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 ZHX3Q9H4I2 956 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 CCDC87Q9NVE4 849 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 MYH4Q9Y623 1939 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 TLDC2A0PJX2 215 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 ZBTB48P10074 688 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 EZRP15311 586 aaKnown RBP22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 XRCC4Q13426 336 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 PARP10Q53GL7 1025 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 MSL1Q68DK7 614 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 TGFBRAP1Q8WUH2 860 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 PBKQ96KB5 322 aa22.35■■□□□ 1.17
SMARCD2-203ENST00000448276 KCNH2Q12809 1159 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 KRT79Q5XKE5 535 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 PEX26Q7Z412 305 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 TPCN2Q8NHX9 752 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 UHMK1Q8TAS1 419 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 TCP11Q8WWU5 503 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 XPO6Q96QU8 1125 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 SELENOSQ9BQE4 189 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 GOPCQ9HD26 462 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 BSDC1Q9NW68 430 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 GGT7Q9UJ14 662 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 RREB1Q92766 1687 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 E9PMD0 336 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 SKAP2O75563 359 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 TMEM266Q2M3C6 531 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 LACTB2Q53H82 288 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 ALKBH5Q6P6C2 394 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 MAPKAPK5Q8IW41 473 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 CHMP6Q96FZ7 201 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 SPAG5Q96R06 1193 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 NAGPAQ9UK23 515 aa22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 AJAP1Q9UKB5 411 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 FRMPD2Q68DX3 1309 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-203ENST00000448276 GCFC2P16383 781 aaKnown RBP22.33■■□□□ 1.17
SMARCD2-203ENST00000448276 HIBADHP31937 336 aaKnown RBP22.33■■□□□ 1.17
SMARCD2-203ENST00000448276 PROM2Q8N271 834 aa22.33■■□□□ 1.17
SMARCD2-203ENST00000448276 NOD2Q9HC29 1040 aa22.33■■□□□ 1.17
SMARCD2-203ENST00000448276 SEC63Q9UGP8 760 aaKnown RBP22.33■■□□□ 1.17
SMARCD2-203ENST00000448276 MYH7BA7E2Y1 1941 aa22.33■■□□□ 1.17
SMARCD2-203ENST00000448276 TRIM37O94972 964 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 ATP6V1G2O95670 118 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 PAEPP09466 180 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 CHN1P15882 459 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 ADAM9Q13443 819 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 GRIK5Q16478 980 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 GJB7Q6PEY0 223 aa22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 RBM46Q8TBY0 533 aaKnown RBP22.33■■□□□ 1.16
SMARCD2-203ENST00000448276 BHMG1C9JSJ3 638 aaPredicted RBP22.32■■□□□ 1.16
SMARCD2-203ENST00000448276 MGRN1O60291 552 aa22.32■■□□□ 1.16
SMARCD2-203ENST00000448276 CLTAP09496 248 aa22.32■■□□□ 1.16
SMARCD2-203ENST00000448276 RASA1P20936 1047 aa22.32■■□□□ 1.16
SMARCD2-203ENST00000448276 FXR2P51116 673 aaKnown RBP eCLIP22.32■■□□□ 1.166e-8■□□□□ 9.9
SMARCD2-203ENST00000448276 FAM133BQ5BKY9 247 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms