RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 GDAP1Q8TB36 358 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 DEPTORQ8TB45 409 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ANKRD49Q8WVL7 239 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 XPO6Q96QU8 1125 aaKnown RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 CDK19Q9BWU1 502 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 CYP19A1P11511 503 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 RFC4P35249 363 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 SGSM1Q2NKQ1 1148 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 FOPNLQ96NB1 174 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 MCM9Q9NXL9 1143 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 PGM3O95394 542 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ECEL1O95672 775 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 TMPRSS15P98073 1019 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 PARP10Q53GL7 1025 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 PROSER2Q86WR7 435 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 GRAMD1AQ96CP6 724 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 LRRC39Q96DD0 335 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 OSBPL1AQ9BXW6 950 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ZNF197O14709 1029 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 MED7O43513 233 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 H2AFZP0C0S5 128 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 CCDC130P13994 396 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 PPARDQ03181 441 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ZNF568Q3ZCX4 644 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 TBC1D9BQ66K14 1250 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 H2AFVQ71UI9 128 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 PYROXD1Q8WU10 500 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 EPN3Q9H201 632 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 CCDC134Q9H6E4 229 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 SETD1BQ9UPS6 1966 aaKnown RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 TAF4O00268 1085 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 MTX1Q13505 466 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 TDRD7Q8NHU6 1098 aaKnown RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 DPH5Q9H2P9 285 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 C5orf58C9J3I9 102 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 PODXLO00592 558 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 MEI1Q5TIA1 1274 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 FBXO42Q6P3S6 717 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 KRT27Q7Z3Y8 459 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ZFP69BQ9UJL9 534 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 TRIM24O15164 1050 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 NPM3O75607 178 aaKnown RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 SNX4O95219 450 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 AP1S1P61966 158 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 CUL4AQ13619 759 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 ANO1Q5XXA6 986 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 FAM207AQ9NSI2 230 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-202ENST00000448238 SMARCAL1Q9NZC9 954 aa9.56□□□□□ -0.88
NIPBL-202ENST00000448238 E7ENQ6 273 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 ARHGDIBP52566 201 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 IYDQ6PHW0 289 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 POTEAQ6S8J7 498 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 NEK9Q8TD19 979 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 SNF8Q96H20 258 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 NDUFA13Q9P0J0 144 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 SENP1Q9P0U3 644 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 MYH11P35749 1972 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PGRMC1O00264 195 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 TNFAIP2Q03169 654 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PDAP1Q13442 181 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 ARMCX6Q7L4S7 300 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 SRPK1Q96SB4 655 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 LSM14BQ9BX40 385 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 TTC41PQ6P2S7 1318 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 IL6P05231 212 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 TERF2Q15554 542 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 MICU2Q8IYU8 434 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 HIPK4Q8NE63 616 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 MNTQ99583 582 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 FTOQ9C0B1 505 aaKnown RBP eCLIP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 SERPINB13Q9UIV8 391 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 A0A1W2PRG6 482 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 TLR3O15455 904 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 CCDC166P0CW27 439 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 HNMTP50135 292 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 CAV1Q03135 178 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 SUZ12Q15022 739 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 LIG4P49917 911 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PICALMQ13492 652 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 CASP8Q14790 479 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 KRT40Q6A162 431 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PRUNE1Q86TP1 453 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 NBPF5PQ86XG9 351 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PSD3Q9NYI0 1048 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 H7C1D1 291 aa9.55□□□□□ -0.88
NIPBL-202ENST00000448238 DCTN2Q13561 401 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 SF3B3Q15393 1217 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 PEG10Q86TG7 708 aaKnown RBP9.55□□□□□ -0.88
NIPBL-202ENST00000448238 NLRX1Q86UT6 975 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms