RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 AFF2P51816 1311 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 ZSCAN5CA6NGD5 496 aaPredicted RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 F5H6K3 240 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 HOXA7P31268 230 aaPredicted RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 HOXD13P35453 343 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 KLRC3Q07444 240 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 NAB2Q15742 525 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SKIDA1Q1XH10 827 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 LENG9Q96B70 501 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 ESYT3A0FGR9 886 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 ASIC2Q16515 512 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 PTPROQ16827 1216 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 DCAF17Q5H9S7 520 aaPredicted RBP13.85□□□□□ -0.19
TRO-215ENST00000445561 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
TRO-215ENST00000445561 DCAF4Q8WV16 495 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 CRYGNQ8WXF5 182 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 MKL1Q969V6 931 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 ZDHHC15Q96MV8 337 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 MBOAT7Q96N66 472 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 DNM3Q9UQ16 869 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 C10orf71Q711Q0 1435 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 GREB1LQ9C091 1923 aaPredicted RBP13.85□□□□□ -0.19
TRO-215ENST00000445561 GLI1P08151 1106 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 PTK2Q05397 1052 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 KCNA1Q09470 495 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 CFAP221Q4G0U5 840 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 AMNQ9BXJ7 453 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 GLT8D2Q9H1C3 349 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 IKZF4Q9H2S9 585 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 AIPL1Q9NZN9 384 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 NYAP2Q9P242 653 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
TRO-215ENST00000445561 PI4KBQ9UBF8 816 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
TRO-215ENST00000445561 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 NPR1P16066 1061 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 JAG1P78504 1218 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 KNOP1Q1ED39 458 aaKnown RBP13.84□□□□□ -0.19
TRO-215ENST00000445561 EDRF1Q3B7T1 1238 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
TRO-215ENST00000445561 SPICE1Q8N0Z3 855 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 GOLGA6CA6NDK9 693 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 SPDYE3A6NKU9 549 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 SFI1A8K8P3 1242 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 MSH4O15457 936 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 AKAP3O75969 853 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 NDUFB10O96000 172 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 GOLGA6DP0CG33 693 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 RPA1P27694 616 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 TCERG1LQ5VWI1 586 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 SYT2Q8N9I0 419 aaPredicted RBP13.84□□□□□ -0.19
TRO-215ENST00000445561 GOLGA6AQ9NYA3 693 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
TRO-215ENST00000445561 ARMCX3Q9UH62 379 aaPredicted RBP13.84□□□□□ -0.19
TRO-215ENST00000445561 GRID2IPA4D2P6 1211 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 TRIM66O15016 1216 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 CLIC2O15247 247 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.19
TRO-215ENST00000445561 UCHL3P15374 230 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 POLD1P28340 1107 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 CASP4P49662 377 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 EPHB4P54760 987 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 KCTD19Q17RG1 926 aaPredicted RBP13.83□□□□□ -0.19
TRO-215ENST00000445561 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 ZNF571Q7Z3V5 609 aaPredicted RBP13.83□□□□□ -0.19
TRO-215ENST00000445561 ERMNQ8TAM6 284 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 ZNF622Q969S3 477 aaKnown RBP eCLIP13.83□□□□□ -0.19
TRO-215ENST00000445561 SPAG5Q96R06 1193 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 RUSC1Q9BVN2 902 aa13.83□□□□□ -0.19
TRO-215ENST00000445561 LUC7LQ9NQ29 371 aaKnown RBP13.83□□□□□ -0.19
TRO-215ENST00000445561 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 EML1O00423 815 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 OPLAHO14841 1288 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 RPS6KA5O75582 802 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 IVLP07476 585 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
TRO-215ENST00000445561 Q4G0T1 1027 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 DPY19L2P1Q6NXN4 242 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 IRF2BP2Q7Z5L9 587 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 FAM76AQ8TAV0 307 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 RBM46Q8TBY0 533 aaKnown RBP13.83□□□□□ -0.2
TRO-215ENST00000445561 IFT81Q8WYA0 676 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 RSPH14Q9UHP6 348 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 AJAP1Q9UKB5 411 aaPredicted RBP13.83□□□□□ -0.2
TRO-215ENST00000445561 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 PCDHGC5Q9Y5F6 944 aa13.83□□□□□ -0.2
TRO-215ENST00000445561 HEXIM1O94992 359 aaKnown RBP13.82□□□□□ -0.2
TRO-215ENST00000445561 GCNT3O95395 438 aa13.82□□□□□ -0.2
TRO-215ENST00000445561 AFPP02771 609 aaKnown RBP13.82□□□□□ -0.2
TRO-215ENST00000445561 FAM153BP0C7A2 387 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms