RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 STAT5BP51692 787 aa22.82■■□□□ 1.24
LRCH3-208ENST00000443727 SETQ01105 290 aaPredicted RBP22.82■■□□□ 1.24
LRCH3-208ENST00000443727 TCTN1Q2MV58 587 aa22.82■■□□□ 1.24
LRCH3-208ENST00000443727 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.82■■□□□ 1.24
LRCH3-208ENST00000443727 DBF4BQ8NFT6 615 aa22.82■■□□□ 1.24
LRCH3-208ENST00000443727 SEPT8Q92599 483 aa22.82■■□□□ 1.24
LRCH3-208ENST00000443727 PCYT2Q99447 389 aa22.82■■□□□ 1.24
LRCH3-208ENST00000443727 CDH23Q9H251 3354 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 RRN3P2A6NIE6 340 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 CDKL5O76039 1030 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 INSRRP14616 1297 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 ANAPC15P60006 121 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 DEFB103AP81534 67 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 PRR16Q569H4 304 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 RUFY4Q6ZNE9 571 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 PLPPR4Q7Z2D5 763 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 TMCO2Q7Z6W1 182 aaPredicted RBP22.81■■□□□ 1.24
LRCH3-208ENST00000443727 CRYGNQ8WXF5 182 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 PPM1EQ8WY54 764 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 SLKQ9H2G2 1235 aaPredicted RBP22.81■■□□□ 1.24
LRCH3-208ENST00000443727 GBF1Q92538 1859 aa22.81■■□□□ 1.24
LRCH3-208ENST00000443727 IGLV3-22A0A075B6J6 115 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 AMHP03971 560 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 PLEKHG4Q58EX7 1191 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 FAM160B1Q5W0V3 765 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 MIS18BP1Q6P0N0 1132 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 FAM117BQ6P1L5 589 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 CERS4Q9HA82 394 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 TBC1D22BQ9NU19 505 aa22.8■■□□□ 1.24
LRCH3-208ENST00000443727 CHD9Q3L8U1 2897 aa22.79■■□□□ 1.24
LRCH3-208ENST00000443727 CCNE2O96020 404 aa22.79■■□□□ 1.24
LRCH3-208ENST00000443727 PLCB4Q15147 1175 aa22.79■■□□□ 1.24
LRCH3-208ENST00000443727 ANKRD1Q15327 319 aa22.79■■□□□ 1.24
LRCH3-208ENST00000443727 FAM49AQ9H0Q0 323 aaPredicted RBP22.79■■□□□ 1.24
LRCH3-208ENST00000443727 MYO9BQ13459 2157 aa22.79■■□□□ 1.24
LRCH3-208ENST00000443727 POTEB3A0JP26 581 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 MBLAC1A4D2B0 266 aaPredicted RBP22.78■■□□□ 1.24
LRCH3-208ENST00000443727 RBAK-RBAKDNI3L0D1 243 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 ATG7O95352 703 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 SLC26A2P50443 739 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 FAM26DQ5JW98 314 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 MARCH8Q5T0T0 291 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 POTEBQ6S5H4 581 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 MYOCDQ8IZQ8 938 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 DNAJB3Q8WWF6 145 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 ARNTL2Q8WYA1 636 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 KAT6AQ92794 2004 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 C22orf23Q9BZE7 217 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 PCDHA4Q9UN74 947 aa22.78■■□□□ 1.24
LRCH3-208ENST00000443727 DHX15O43143 795 aaKnown RBP22.77■■□□□ 1.24
LRCH3-208ENST00000443727 GJB5O95377 273 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 CHRNA1P02708 482 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 RPLP2P05387 115 aaKnown RBP22.77■■□□□ 1.24
LRCH3-208ENST00000443727 CIITAP33076 1130 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 TAP1Q03518 808 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 ADGRE1Q14246 886 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 PDXDC2PQ6P474 469 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 ABHD15Q6UXT9 468 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.77■■□□□ 1.248e-7■■■■□ 21.3
LRCH3-208ENST00000443727 RPAINQ86UA6 219 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 RAD9AQ99638 391 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 IFIH1Q9BYX4 1025 aaKnown RBP22.77■■□□□ 1.24
LRCH3-208ENST00000443727 ZNF302Q9NR11 478 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 TPCN1Q9ULQ1 816 aa22.77■■□□□ 1.24
LRCH3-208ENST00000443727 DLL1O00548 723 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 USP11P51784 963 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 KRT76Q01546 638 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 SCRN1Q12765 414 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 CCDC85BQ15834 202 aaPredicted RBP22.76■■□□□ 1.23
LRCH3-208ENST00000443727 GALNT17Q6IS24 598 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 ZNF746Q6NUN9 644 aaPredicted RBP22.76■■□□□ 1.23
LRCH3-208ENST00000443727 SWSAP1Q6NVH7 229 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 CKAP2LQ8IYA6 745 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 BLIDQ8IZY5 108 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 TRAPPC12Q8WVT3 735 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 APBB2Q92870 758 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 ZBTB10Q96DT7 871 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 SAMM50Q9Y512 469 aa22.76■■□□□ 1.23
LRCH3-208ENST00000443727 IGKV6D-21A0A0A0MT36 114 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 M0QZ92 97 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 PFKFB2O60825 505 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 GHRP10912 638 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 XBP1P17861 261 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 AK2P54819 239 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 IER5Q5VY09 327 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 CCDC60Q8IWA6 550 aaPredicted RBP22.75■■□□□ 1.23
LRCH3-208ENST00000443727 SMAP1Q8IYB5 467 aaPredicted RBP22.75■■□□□ 1.23
LRCH3-208ENST00000443727 FAM177A1Q8N128 213 aaPredicted RBP22.75■■□□□ 1.23
LRCH3-208ENST00000443727 MICALL1Q8N3F8 863 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 TBCKQ8TEA7 893 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 ATP8B4Q8TF62 1192 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 AIFM3Q96NN9 605 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 OSBPL7Q9BZF2 842 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 CDY2AQ9Y6F7 541 aa22.75■■□□□ 1.23
LRCH3-208ENST00000443727 LCHNA4D1U4 455 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 RFXAPO00287 272 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 GTPBP6O43824 516 aaPredicted RBP22.74■■□□□ 1.23
LRCH3-208ENST00000443727 HBP1O60381 514 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 PSAPP07602 524 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 MRPS6P82932 125 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms