RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ARHGEF18Q6ZSZ5 1173 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 CHST13Q8NET6 341 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 MAGEB10Q96LZ2 347 aaPredicted RBP6.89□□□□□ -1.31
VPS50-206ENST00000443443 RBM15Q96T37 977 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS50-206ENST00000443443 DNAJC2Q99543 621 aaKnown RBP6.89□□□□□ -1.31
VPS50-206ENST00000443443 TACO1Q9BSH4 297 aaKnown RBP6.89□□□□□ -1.31
VPS50-206ENST00000443443 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 ATP23Q9Y6H3 246 aa6.89□□□□□ -1.31
VPS50-206ENST00000443443 CCDC66A2RUB6 948 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 FAM90A27PA6NNH2 459 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 ZNF839A8K0R7 811 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 ARVCFO00192 962 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 KCNK3O14649 394 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 LAMTOR5O43504 91 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 MAGEA10P43363 369 aaPredicted RBP6.88□□□□□ -1.31
VPS50-206ENST00000443443 PPP2CBP62714 309 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 PPP2CAP67775 309 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 PDGFDQ9GZP0 370 aaPredicted RBP6.88□□□□□ -1.31
VPS50-206ENST00000443443 CBLCQ9ULV8 474 aa6.88□□□□□ -1.31
VPS50-206ENST00000443443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.87□□□□□ -1.31
VPS50-206ENST00000443443 MAN2B1O00754 1011 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 WNT9AO14904 365 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 EFCAB14O75071 495 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 AMY2AP04746 511 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 COL6A1P12109 1028 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 AMY2BP19961 511 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 NFKB2Q00653 900 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 DBPQ10586 325 aaPredicted RBP6.87□□□□□ -1.31
VPS50-206ENST00000443443 KISS1RQ969F8 398 aaPredicted RBP6.87□□□□□ -1.31
VPS50-206ENST00000443443 MKL1Q969V6 931 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 MBD6Q96DN6 1003 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 SLC52A2Q9HAB3 445 aa6.87□□□□□ -1.31
VPS50-206ENST00000443443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.86□□□□□ -1.31
VPS50-206ENST00000443443 PRAMEF25A6NGN4 478 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 H0Y858 1186 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 KLHL18O94889 574 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 KNG1P01042 644 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 CHGBP05060 677 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 INSRRP14616 1297 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 Q6ZUG5 572 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 ZSWIM2Q8NEG5 633 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
VPS50-206ENST00000443443 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
VPS50-206ENST00000443443 PUS7Q96PZ0 661 aaKnown RBP6.86□□□□□ -1.31
VPS50-206ENST00000443443 RASGRP1O95267 797 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 IL18BPO95998 194 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 ZXDCQ2QGD7 858 aaPredicted RBP6.85□□□□□ -1.31
VPS50-206ENST00000443443 DPP8Q6V1X1 898 aaPredicted RBP6.85□□□□□ -1.31
VPS50-206ENST00000443443 GGNQ86UU5 652 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 CISD2Q8N5K1 135 aaKnown RBP6.85□□□□□ -1.31
VPS50-206ENST00000443443 SLC7A14Q8TBB6 771 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 BORCS6Q96GS4 357 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 SAMD11Q96NU1 681 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 KCND1Q9NSA2 647 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 PPP4R1LQ9P1A2 415 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 SFMBT1Q9UHJ3 866 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 ADAM29Q9UKF5 820 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 COQ6Q9Y2Z9 468 aa6.85□□□□□ -1.31
VPS50-206ENST00000443443 CCDC163A0A0D9SF12 145 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 ESYT3A0FGR9 886 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 GJA4P35212 333 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 FIGNQ5HY92 759 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 PKN3Q6P5Z2 889 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 GPR155Q7Z3F1 870 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 RALYLQ86SE5 291 aaKnown RBP6.84□□□□□ -1.31
VPS50-206ENST00000443443 WDR48Q8TAF3 677 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 PTPN18Q99952 460 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
VPS50-206ENST00000443443 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 SCDO00767 359 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 LACTBP83111 547 aaPredicted RBP6.83□□□□□ -1.32
VPS50-206ENST00000443443 PUM1Q14671 1186 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS50-206ENST00000443443 WDR72Q3MJ13 1102 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 CPZQ66K79 652 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 CIR1Q86X95 450 aaPredicted RBP6.83□□□□□ -1.32
VPS50-206ENST00000443443 LILRB2Q8N423 598 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 OSBPL2Q9H1P3 480 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 SMURF1Q9HCE7 757 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 PTCH2Q9Y6C5 1203 aa6.83□□□□□ -1.32
VPS50-206ENST00000443443 PTGS1P23219 599 aa6.82□□□□□ -1.32
VPS50-206ENST00000443443 ADAM17P78536 824 aa6.82□□□□□ -1.32
VPS50-206ENST00000443443 BMS1Q14692 1282 aaKnown RBP6.82□□□□□ -1.32
VPS50-206ENST00000443443 IFNL2Q8IZJ0 200 aa6.82□□□□□ -1.32
VPS50-206ENST00000443443 GSTCDQ8NEC7 633 aa6.82□□□□□ -1.32
VPS50-206ENST00000443443 SREK1Q8WXA9 508 aaKnown RBP6.82□□□□□ -1.32
VPS50-206ENST00000443443 AJUBAQ96IF1 538 aa6.82□□□□□ -1.32
VPS50-206ENST00000443443 CLASP2O75122 1294 aaKnown RBP6.81□□□□□ -1.32
VPS50-206ENST00000443443 C4BPAP04003 597 aaKnown RBP6.81□□□□□ -1.32
VPS50-206ENST00000443443 EPHB4P54760 987 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 NFE2L2Q16236 605 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 ZNF568Q3ZCX4 644 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 C2orf27AQ580R0 203 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 SLFN13Q68D06 897 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 BRAPQ7Z569 592 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 SCLYQ96I15 445 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 SSBP3Q9BWW4 388 aaPredicted RBP6.81□□□□□ -1.32
VPS50-206ENST00000443443 CARD11Q9BXL7 1154 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms