RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 HMGCS2P54868 508 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 NUCB1Q02818 461 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 FAAP100Q0VG06 881 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 SPP2Q13103 211 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 IFIT5Q13325 482 aaKnown RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 LRRC41Q15345 812 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 ANKRD45Q5TZF3 282 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 TMEM164Q5U3C3 297 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 C16orf46Q6P387 395 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 ZNF365Q70YC5 407 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 CBLL1Q75N03 491 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 C16orf59Q7L2K0 433 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 RNF180Q86T96 592 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 PRSS33Q8NF86 280 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 OTUD7AQ8TE49 926 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 CLP1Q92989 425 aaKnown RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 FAM84BQ96KN1 310 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 FAM83CQ9BQN1 747 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 UPF3BQ9BZI7 483 aaKnown RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 CEP295Q9C0D2 2601 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 LNPKQ9C0E8 428 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 PORCNQ9H237 461 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 COPRSQ9NQ92 184 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 SH2B1Q9NRF2 756 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 HDAC5Q9UQL6 1122 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 YBX2Q9Y2T7 364 aaKnown RBP5.78□□□□□ -1.48
PTPN4-206ENST00000441089 ATRNL1Q5VV63 1379 aa5.78□□□□□ -1.48
PTPN4-206ENST00000441089 KMT2EQ8IZD2 1858 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 WDR64B1ANS9 1081 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 ENTPD3O75355 529 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 SURF6O75683 361 aaKnown RBP5.77□□□□□ -1.49
PTPN4-206ENST00000441089 FGBP02675 491 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 BRD2P25440 801 aaKnown RBP5.77□□□□□ -1.49
PTPN4-206ENST00000441089 CYP2C19P33261 490 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 CHAF1AQ13111 956 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-206ENST00000441089 MSMPQ1L6U9 139 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 UVSSAQ2YD98 709 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 LRRC24Q50LG9 513 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 OLFML2BQ68BL8 750 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 CDC42EP5Q6NZY7 148 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 BMP8AQ7Z5Y6 402 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 CHD1LQ86WJ1 897 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 ZSCAN29Q8IWY8 852 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-206ENST00000441089 ETFBKMTQ8IXQ9 262 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 KLHDC7BQ96G42 594 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 CEP41Q9BYV8 373 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 PUS3Q9BZE2 481 aaKnown RBP5.77□□□□□ -1.49
PTPN4-206ENST00000441089 AS3MTQ9HBK9 375 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 IL23AQ9NPF7 189 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 CNNM1Q9NRU3 951 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 TMOD4Q9NZQ9 345 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 FLRT1Q9NZU1 646 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 LMCD1Q9NZU5 365 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 RBPJLQ9UBG7 517 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 TBX21Q9UL17 535 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 FAM50BQ9Y247 325 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 SLC4A7Q9Y6M7 1214 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 DMDP11532 3685 aa5.77□□□□□ -1.49
PTPN4-206ENST00000441089 ZNF536O15090 1300 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 SALL3Q9BXA9 1300 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 ZNF236Q9UL36 1845 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 A0A1W2PQ45 241 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-206ENST00000441089 A0A1W2PQY0 241 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 FSCN2O14926 492 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 RAB11FIP3O75154 756 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 BMP3P12645 472 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 CSF2RAP15509 400 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 ARID4AP29374 1257 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-206ENST00000441089 RGS3P49796 1198 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 LEXMQ3ZCV2 418 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 CAVIN4Q5BKX8 364 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 TAF7LQ5H9L4 462 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 TMEM67Q5HYA8 995 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 ANO1Q5XXA6 986 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 LDHAL6AQ6ZMR3 332 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 BEND4Q6ZU67 534 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 ATG9AQ7Z3C6 839 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 SUGP1Q8IWZ8 645 aaKnown RBP5.76□□□□□ -1.49
PTPN4-206ENST00000441089 TRPV1Q8NER1 839 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 NUP133Q8WUM0 1156 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 PAGR1Q9BTK6 254 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 OSBPL5Q9H0X9 879 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-206ENST00000441089 SIL1Q9H173 461 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 RASSF4Q9H2L5 321 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 UBE2ZQ9H832 354 aaPredicted RBP5.76□□□□□ -1.49
PTPN4-206ENST00000441089 TXNRD2Q9NNW7 524 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 IL1RAPL2Q9NP60 686 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 SLC5A4Q9NY91 659 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 PRKAG3Q9UGI9 489 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 RABGAP1Q9Y3P9 1069 aa5.76□□□□□ -1.49
PTPN4-206ENST00000441089 ASH1LQ9NR48 2969 aaKnown RBP5.76□□□□□ -1.49
PTPN4-206ENST00000441089 DNAH14Q0VDD8 3507 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 CDK5RAP2Q96SN8 1893 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.75□□□□□ -1.49
PTPN4-206ENST00000441089 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 C19orf81C9J6K1 198 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 PROB1E7EW31 1015 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 EYA2O00167 538 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 ACRP10323 421 aa5.75□□□□□ -1.49
PTPN4-206ENST00000441089 RARBP10826 455 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms