RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CYP11B2P19099 503 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 MAGEA9P43362 315 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 DNM2P50570 870 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 GTF2A1P52655 376 aaPredicted RBP15.63■□□□□ 0.09
LIMD1-202ENST00000440097 VSNL1P62760 191 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 FKBP15Q5T1M5 1219 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 ICE2Q659A1 982 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 DCAF15Q66K64 600 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 PACS2Q86VP3 889 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 TPH2Q8IWU9 490 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 WDR18Q9BV38 432 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 NFIBO00712 420 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 PLA2G6O60733 806 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 FGFR1OPO95684 399 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 PRKG1Q13976 671 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 CTTNQ14247 550 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 CASP8Q14790 479 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 TTC31Q49AM3 519 aaPredicted RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 CEP55Q53EZ4 464 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 EIF2AK1Q9BQI3 630 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 NAA15Q9BXJ9 866 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 FHDC1Q9C0D6 1143 aaPredicted RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 KIAA1683Q9H0B3 1180 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 BHMT2Q9H2M3 363 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 POLD4Q9HCU8 107 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 LUC7L2Q9Y383 392 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 IGLV3-22A0A075B6J6 115 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 EML1O00423 815 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 TRAF5O00463 557 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 PTGER2P43116 358 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 MSL3Q8N5Y2 521 aaKnown RBP15.62■□□□□ 0.09
LIMD1-202ENST00000440097 PIGOQ8TEQ8 1089 aa15.62■□□□□ 0.09
LIMD1-202ENST00000440097 ANKRD65E5RJM6 399 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 VCAM1P19320 739 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 LRRC63Q05C16 580 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 HSP90B2PQ58FF3 399 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 LRRC31Q6UY01 552 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 CCDC51Q96ER9 411 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 RPAP3Q9H6T3 665 aaPredicted RBP15.61■□□□□ 0.09
LIMD1-202ENST00000440097 VAV3Q9UKW4 847 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 TTC26A0AVF1 554 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 SLC12A3P55017 1021 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 FGFBP2Q9BYJ0 223 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 RABGAP1Q9Y3P9 1069 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 LTBP3Q9NS15 1303 aa15.61■□□□□ 0.09
LIMD1-202ENST00000440097 COBLL1Q53SF7 1204 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 FAM71BQ8TC56 605 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 SGIP1Q9BQI5 828 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 PLEKHA4Q9H4M7 779 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 GGA3Q9NZ52 723 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 STK24Q9Y6E0 443 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 CTAGE9A4FU28 777 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 KLK7P49862 253 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 CCDC40Q4G0X9 1142 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 SLC35F6Q8N357 371 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 TRPM4Q8TD43 1214 aa15.6■□□□□ 0.09
LIMD1-202ENST00000440097 BRCA1P38398 1863 aaKnown RBP15.6■□□□□ 0.09
LIMD1-202ENST00000440097 A0A1W2PQC6 194 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 TBCAO75347 108 aaKnown RBP15.59■□□□□ 0.09
LIMD1-202ENST00000440097 ARP10275 920 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 ARSHQ5FYA8 562 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 OTOP1Q7RTM1 612 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 ZNF507Q8TCN5 953 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 DYDC2Q96IM9 177 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 REEP2Q9BRK0 252 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 ZHX2Q9Y6X8 837 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 ZNF536O15090 1300 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 LRRIQ3A6PVS8 624 aaPredicted RBP15.59■□□□□ 0.09
LIMD1-202ENST00000440097 ABL1P00519 1130 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 USP14P54578 494 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 EHHADHQ08426 723 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 NSMFQ6X4W1 530 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 MCF2L2Q86YR7 1114 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 TMTC1Q8IUR5 882 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 FAM204AQ9H8W3 233 aa15.59■□□□□ 0.09
LIMD1-202ENST00000440097 IPO5O00410 1097 aaKnown RBP15.58■□□□□ 0.09
LIMD1-202ENST00000440097 SLC26A4O43511 780 aa15.58■□□□□ 0.09
LIMD1-202ENST00000440097 ZBED4O75132 1171 aa15.58■□□□□ 0.09
LIMD1-202ENST00000440097 FKBP3Q00688 224 aaKnown RBP15.58■□□□□ 0.09
LIMD1-202ENST00000440097 APOBEC3FQ8IUX4 373 aaKnown RBP15.58■□□□□ 0.09
LIMD1-202ENST00000440097 SYT2Q8N9I0 419 aaPredicted RBP15.58■□□□□ 0.09
LIMD1-202ENST00000440097 OR8K1Q8NGG5 319 aa15.58■□□□□ 0.09
LIMD1-202ENST00000440097 JRKLQ9Y4A0 524 aa15.58■□□□□ 0.09
LIMD1-202ENST00000440097 SAMM50Q9Y512 469 aa15.58■□□□□ 0.09
LIMD1-202ENST00000440097 CTAGE15A4D2H0 777 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 CTAGE8P0CG41 777 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 HMGCS2P54868 508 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 CORO7P57737 925 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 SETQ01105 290 aaPredicted RBP15.58■□□□□ 0.08
LIMD1-202ENST00000440097 TUBB2AQ13885 445 aa15.58■□□□□ 0.08
LIMD1-202ENST00000440097 DLK2Q6UY11 383 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms