RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ORC4O43929 436 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 VPS41P49754 854 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 PABPC4Q13310 644 aaKnown RBP eCLIP9.86□□□□□ -0.831e-9■■□□□ 12.2
COPB1-202ENST00000439561 PARP10Q53GL7 1025 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 MEI1Q5TIA1 1274 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GALNT17Q6IS24 598 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 DGKHQ86XP1 1220 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 FMNL3Q8IVF7 1028 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 SH3RF3Q8TEJ3 882 aaPredicted RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 RAD54LQ92698 747 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 FAM167BQ9BTA0 163 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 OSBPL7Q9BZF2 842 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 PLCB1Q9NQ66 1216 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 SH3GLB2Q9NR46 395 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 EMILIN3Q9NT22 766 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 MTRF1LQ9UGC7 380 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 DDX25Q9UHL0 483 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 TMEM94Q12767 1356 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 CAND2O75155 1236 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 TBCAO75347 108 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 HSPA9P38646 679 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 CRKLP46109 303 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 CYP4A11Q02928 519 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GRB10Q13322 594 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 UBE4AQ14139 1066 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GRM4Q14833 912 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 NBPF9Q3BBW0 867 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 ZSCAN29Q8IWY8 852 aaPredicted RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 CCDC105Q8IYK2 499 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GDAP1Q8TB36 358 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GLG1Q92896 1179 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 KLHL29Q96CT2 875 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 STAMBPL1Q96FJ0 436 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 PRMT1Q99873 361 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 ZMYND12Q9H0C1 365 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 NOD2Q9HC29 1040 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 CNOT8Q9UFF9 292 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 SLC37A4O43826 429 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 KIF1CO43896 1103 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 LRRN2O75325 713 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GCNT3O95395 438 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 ZNF76P36508 570 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 DR1Q01658 176 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 KCNMA1Q12791 1236 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GJB7Q6PEY0 223 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 NEK9Q8TD19 979 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 NSMCE1Q8WV22 266 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 MRRFQ96E11 262 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 SPDL1Q96EA4 605 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 GPR101Q96P66 508 aaPredicted RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 XPO6Q96QU8 1125 aaKnown RBP9.86□□□□□ -0.83
COPB1-202ENST00000439561 NEUROG2Q9H2A3 272 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 CTTNBP2NLQ9P2B4 639 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 MAD2L2Q9UI95 211 aa9.86□□□□□ -0.83
COPB1-202ENST00000439561 ARFGEF2Q9Y6D5 1785 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 PVALEFA0A1B0GWK0 134 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 TRAPPC3O43617 180 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 GCFC2P16383 781 aaKnown RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 TNFAIP3P21580 790 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 FGFR4P22455 802 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 SLC16A2P36021 539 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 PRPHP41219 470 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 STAT1P42224 750 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 SSR1P43307 286 aaKnown RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 SPRED3Q2MJR0 410 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 PREPLQ4J6C6 727 aaPredicted RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 RCSD1Q6JBY9 416 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 KCNK18Q7Z418 384 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 NBPF5PQ86XG9 351 aaPredicted RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 TAOK3Q9H2K8 898 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 FAM114A2Q9NRY5 505 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 MINPP1Q9UNW1 487 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 SLIT3O75094 1523 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 POTEB3A0JP26 581 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 CCDC169A6NNP5 214 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 USP17L5A8MUK1 530 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 POTECB2RU33 542 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 ERVV-1B6SEH8 477 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 TLR2O60603 784 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 GSCP56915 257 aaPredicted RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 POTEBQ6S5H4 581 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 CLEC10AQ8IUN9 316 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 ZNF34Q8IZ26 560 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 SYCE1Q8N0S2 351 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 PIK3R5Q8WYR1 880 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 INPP4AQ96PE3 977 aaPredicted RBP9.85□□□□□ -0.83
COPB1-202ENST00000439561 IL17RBQ9NRM6 502 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 GCNT4Q9P109 453 aa9.85□□□□□ -0.83
COPB1-202ENST00000439561 SFI1A8K8P3 1242 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 RPS8P62241 208 aaKnown RBP9.84□□□□□ -0.83
COPB1-202ENST00000439561 DRP2Q13474 957 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 NUGGCQ68CJ6 796 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 GLYCTKQ8IVS8 523 aa9.84□□□□□ -0.83
COPB1-202ENST00000439561 LRRC34Q8IZ02 419 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms