RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 CCDC43Q96MW1 224 aaKnown RBP18.37■□□□□ 0.53
TTC3-209ENST00000438055 KIAA1551Q9HCM1 1747 aa18.37■□□□□ 0.53
TTC3-209ENST00000438055 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
TTC3-209ENST00000438055 ABCB11O95342 1321 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 MYBP10242 640 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 SLC18A3Q16572 532 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 TRIM59Q8IWR1 403 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 RASSF4Q9H2L5 321 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 CTTNQ14247 550 aaKnown RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 HGSNATQ68CP4 663 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 APOBEC3HQ6NTF7 200 aaKnown RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 MAEAQ7L5Y9 396 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 RNF10Q8N5U6 811 aaKnown RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 CYP2W1Q8TAV3 490 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 PI4KBQ9UBF8 816 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 CALUO43852 315 aaPredicted RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 PPP1R12BO60237 982 aaPredicted RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 CARSP49589 748 aaKnown RBP18.36■□□□□ 0.53
TTC3-209ENST00000438055 CCDC174Q6PII3 467 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 RDH13Q8NBN7 331 aa18.36■□□□□ 0.53
TTC3-209ENST00000438055 RPL13P26373 211 aaKnown RBP18.35■□□□□ 0.53
TTC3-209ENST00000438055 USP11P51784 963 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 NOL4O94818 638 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 GH2P01242 217 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 GNGT1P63211 74 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 KNOP1Q1ED39 458 aaKnown RBP18.35■□□□□ 0.53
TTC3-209ENST00000438055 LRRC31Q6UY01 552 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
TTC3-209ENST00000438055 RABGAP1Q9Y3P9 1069 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 POLRMTO00411 1230 aaKnown RBP18.35■□□□□ 0.53
TTC3-209ENST00000438055 TNNC1P63316 161 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 PTK2Q05397 1052 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 FAM107BQ9H098 131 aa18.35■□□□□ 0.53
TTC3-209ENST00000438055 PPFIA1Q13136 1202 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 PAK2Q13177 524 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 ALKBH5Q6P6C2 394 aaKnown RBP18.34■□□□□ 0.53
TTC3-209ENST00000438055 AP1M1Q9BXS5 423 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 LAMB1P07942 1786 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 IGKV6D-41A0A0C4DH26 115 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 HOXA10P31260 410 aaPredicted RBP18.34■□□□□ 0.53
TTC3-209ENST00000438055 CCT5P48643 541 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 CYP2J2P51589 502 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 ZCWPW2Q504Y3 356 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 GJB7Q6PEY0 223 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 CAPS2Q9BXY5 557 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 TDRD3Q9H7E2 651 aaKnown RBP18.34■□□□□ 0.53
TTC3-209ENST00000438055 GCNT4Q9P109 453 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 BCCIPQ9P287 314 aaKnown RBP eCLIP18.34■□□□□ 0.53
TTC3-209ENST00000438055 SHTN1A0MZ66 631 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 GLI1P08151 1106 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 ABCB4P21439 1286 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 AENQ8WTP8 325 aaKnown RBP18.34■□□□□ 0.53
TTC3-209ENST00000438055 BCAS3Q9H6U6 928 aa18.34■□□□□ 0.53
TTC3-209ENST00000438055 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.53
TTC3-209ENST00000438055 GFPT2O94808 682 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 NDUFB10O96000 172 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 UCHL3P15374 230 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 AARSP49588 968 aaKnown RBP eCLIP18.33■□□□□ 0.535e-6■■■□□ 16
TTC3-209ENST00000438055 CASP4P49662 377 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 CLK2P49760 499 aaKnown RBP18.33■□□□□ 0.53
TTC3-209ENST00000438055 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.53
TTC3-209ENST00000438055 SYDE2Q5VT97 1194 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 GBP6Q6ZN66 633 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 SRLQ86TD4 932 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 SYCP3Q8IZU3 236 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 BCAS4Q8TDM0 211 aa18.33■□□□□ 0.53
TTC3-209ENST00000438055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.531e-6■■■■■ 50
TTC3-209ENST00000438055 GOLGA6L10A6NI86 522 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 FLOT1O75955 427 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 KRT14P02533 472 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 NR3C1P04150 777 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 PRLRP16471 622 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 NAB2Q15742 525 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 ARSHQ5FYA8 562 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 EMBQ6PCB8 327 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 PEX26Q7Z412 305 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 KSR1Q8IVT5 923 aa18.33■□□□□ 0.52
TTC3-209ENST00000438055 MSL3Q8N5Y2 521 aaKnown RBP18.33■□□□□ 0.52
TTC3-209ENST00000438055 TSEN2Q8NCE0 465 aaKnown RBP18.33■□□□□ 0.52
TTC3-209ENST00000438055 BMP3P12645 472 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 ALDH1B1P30837 517 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 KCNA1Q09470 495 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 DCAF4Q8WV16 495 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 EHD4Q9H223 541 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 SUGT1Q9Y2Z0 365 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 FAM86B1E9PN63 330 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 FAM86B2P0C5J1 330 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 GIT2Q14161 759 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 IFI16Q16666 785 aaKnown RBP18.32■□□□□ 0.52
TTC3-209ENST00000438055 TRIM31Q9BZY9 425 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 TSPYL1Q9H0U9 437 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 DLEC1Q9Y238 1755 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 PJA2O43164 708 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 HPDP32754 393 aaPredicted RBP18.32■□□□□ 0.52
TTC3-209ENST00000438055 AP3B2Q13367 1082 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms