RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
NUP50-210ENST00000434760 NIPA1Q7RTP0 329 aa17.98■□□□□ 0.47
NUP50-210ENST00000434760 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
NUP50-210ENST00000434760 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
NUP50-210ENST00000434760 TUBE1Q9UJT0 475 aa17.98■□□□□ 0.47
NUP50-210ENST00000434760 CCNE2O96020 404 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 NEFLP07196 543 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 IFNAR1P17181 557 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
NUP50-210ENST00000434760 ACTR2P61160 394 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 IKBKEQ14164 716 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 JAKMIP3Q5VZ66 844 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUP50-210ENST00000434760 SMARCAD1Q9H4L7 1026 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 CERS4Q9HA82 394 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 TTC3P53804 2025 aa17.97■□□□□ 0.47
NUP50-210ENST00000434760 RFXAPO00287 272 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 PPFIA3O75145 1194 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 CYP3A4P08684 503 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 POU3F3P20264 500 aaPredicted RBP17.96■□□□□ 0.47
NUP50-210ENST00000434760 TAF2Q6P1X5 1199 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 REXO1Q8N1G1 1221 aaKnown RBP17.96■□□□□ 0.47
NUP50-210ENST00000434760 GLG1Q92896 1179 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 ZBTB10Q96DT7 871 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
NUP50-210ENST00000434760 IGKV6D-21A0A0A0MT36 114 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 KIF28PB7ZC32 967 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 DHX15O43143 795 aaKnown RBP17.95■□□□□ 0.46
NUP50-210ENST00000434760 LPXNO60711 386 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 ATG7O95352 703 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 CHRNA1P02708 482 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 IGFBP4P22692 258 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 RASGRP4Q8TDF6 673 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 CCDC12Q8WUD4 166 aaPredicted RBP17.95■□□□□ 0.46
NUP50-210ENST00000434760 LENG9Q96B70 501 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
NUP50-210ENST00000434760 TM6SF1Q9BZW5 370 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 MTCH2Q9Y6C9 303 aa17.95■□□□□ 0.46
NUP50-210ENST00000434760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.94■□□□□ 0.46
NUP50-210ENST00000434760 LINC01553A4QN01 128 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 EDIL3O43854 480 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 CCT2P78371 535 aaKnown RBP17.94■□□□□ 0.46
NUP50-210ENST00000434760 HTRA4P83105 476 aaPredicted RBP17.94■□□□□ 0.46
NUP50-210ENST00000434760 PLCB4Q15147 1175 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 SP7Q8TDD2 431 aaPredicted RBP17.94■□□□□ 0.46
NUP50-210ENST00000434760 ARNTL2Q8WYA1 636 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 SEPT8Q92599 483 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 RAD9AQ99638 391 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 SLC26A6Q9BXS9 759 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 VPS54Q9P1Q0 977 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 THEGQ9P2T0 379 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 BDP1A6H8Y1 2624 aa17.94■□□□□ 0.46
NUP50-210ENST00000434760 INSRRP14616 1297 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 SETQ01105 290 aaPredicted RBP17.93■□□□□ 0.46
NUP50-210ENST00000434760 KRT40Q6A162 431 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 PLPPR4Q7Z2D5 763 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 CCDC60Q8IWA6 550 aaPredicted RBP17.93■□□□□ 0.46
NUP50-210ENST00000434760 MYOCDQ8IZQ8 938 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 CCDC148Q8NFR7 591 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 TRAPPC12Q8WVT3 735 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 PPM1EQ8WY54 764 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 IFIH1Q9BYX4 1025 aaKnown RBP17.93■□□□□ 0.46
NUP50-210ENST00000434760 C6orf50Q9HD87 102 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 CYP46A1Q9Y6A2 500 aa17.93■□□□□ 0.46
NUP50-210ENST00000434760 IPO5O00410 1097 aaKnown RBP17.92■□□□□ 0.46
NUP50-210ENST00000434760 AMHP03971 560 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 GHRP10912 638 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 CIITAP33076 1130 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 GRB10Q13322 594 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 LPIN1Q14693 890 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 NPY5RQ15761 445 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 CCDC85BQ15834 202 aaPredicted RBP17.92■□□□□ 0.46
NUP50-210ENST00000434760 MCTP2Q6DN12 878 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 FAM117BQ6P1L5 589 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 ABHD15Q6UXT9 468 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 GDPD5Q8WTR4 605 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 DNAJB3Q8WWF6 145 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 APBB2Q92870 758 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 ZBED2Q9BTP6 218 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 AZI2Q9H6S1 392 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
NUP50-210ENST00000434760 DDX39AO00148 427 aaKnown RBP17.91■□□□□ 0.46
NUP50-210ENST00000434760 GNA11P29992 359 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 ZNF76P36508 570 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 STAT5BP51692 787 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 ERVK-21P61565 698 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 IGBP1P78318 339 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 MRPS6P82932 125 aaKnown RBP17.91■□□□□ 0.46
NUP50-210ENST00000434760 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 FBXO47Q5MNV8 452 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 ZNF274Q96GC6 653 aaPredicted RBP17.91■□□□□ 0.46
NUP50-210ENST00000434760 RC3H2Q9HBD1 1191 aaKnown RBP17.91■□□□□ 0.46
NUP50-210ENST00000434760 SH3GLB2Q9NR46 395 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 TRPC6Q9Y210 931 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 CDY2AQ9Y6F7 541 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 TCF20Q9UGU0 1960 aaKnown RBP17.91■□□□□ 0.46
NUP50-210ENST00000434760 IGSF9BQ9UPX0 1349 aa17.91■□□□□ 0.46
NUP50-210ENST00000434760 RRN3P2A6NIE6 340 aa17.9■□□□□ 0.46
NUP50-210ENST00000434760 ZBTB42B2RXF5 422 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms