RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.43
USP4-205ENST00000431357 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.43
USP4-205ENST00000431357 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
USP4-205ENST00000431357 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 LTBP4Q8N2S1 1624 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 PDXKO00764 312 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 EIF3HO15372 352 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■■■■□ 20.2
USP4-205ENST00000431357 AFPP02771 609 aaKnown RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 NR2F2P24468 414 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 QRICH1Q2TAL8 776 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 Q4G0T1 1027 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 EFCAB13Q8IY85 973 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 FAM133AQ8N9E0 248 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 SYT2Q8N9I0 419 aaPredicted RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 PPM1EQ8WY54 764 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 ARMCX3Q9UH62 379 aaPredicted RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 ADAMTS1Q9UHI8 967 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 FBXL5Q9UKA1 691 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
USP4-205ENST00000431357 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
USP4-205ENST00000431357 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 MED24O75448 989 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 FTCDO95954 541 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 GLI1P08151 1106 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 RPA1P27694 616 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 PRKCIP41743 596 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 GUCY2DQ02846 1103 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 ARSHQ5FYA8 562 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 ICE2Q659A1 982 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 IQCKQ8N0W5 287 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP38Q8NB14 1042 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 HINFPQ9BQA5 517 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 NYAP2Q9P242 653 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L15C9J2P7 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L13C9JLJ4 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L11C9JVI0 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L18D6R9N7 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L22D6RA61 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L17D6RBQ6 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L19D6RCP7 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L20D6RJB6 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 EBAG9O00559 213 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 GNGT1P63211 74 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L24Q0WX57 530 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 GIT2Q14161 759 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 BMT2Q1RMZ1 405 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 EPM2AIP1Q7L775 607 aaPredicted RBP12.38□□□□□ -0.43
USP4-205ENST00000431357 IRF2BP2Q7Z5L9 587 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 GJA10Q969M2 543 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 FAM20AQ96MK3 541 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 TMEM59LQ9UK28 342 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 NFU1Q9UMS0 254 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 LTBP1Q14766 1721 aa12.38□□□□□ -0.43
USP4-205ENST00000431357 A0A087WUV0 522 aaPredicted RBP12.37□□□□□ -0.43
USP4-205ENST00000431357 FLOT1O75955 427 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 UCHL3P15374 230 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 MRPS25P82663 173 aaKnown RBP12.37□□□□□ -0.43
USP4-205ENST00000431357 ARHGAP4P98171 946 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 ARID5AQ03989 594 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 EXOC3L4Q17RC7 722 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 CDC42EP5Q6NZY7 148 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 VPS36Q86VN1 386 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 ETNPPLQ8TBG4 499 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 ACTRT1Q8TDG2 376 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
USP4-205ENST00000431357 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
USP4-205ENST00000431357 KRT12Q99456 494 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 ZC3H12CQ9C0D7 883 aaKnown RBP12.37□□□□□ -0.43
USP4-205ENST00000431357 ZHX3Q9H4I2 956 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 KANSL2Q9H9L4 492 aa12.37□□□□□ -0.43
USP4-205ENST00000431357 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms