RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 LPIN1Q14693 890 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 PKN1Q16512 942 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 PFKFB3Q16875 520 aaPredicted RBP18.6■□□□□ 0.57
PTPRA-206ENST00000430705 CEP55Q53EZ4 464 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 BRF1Q92994 677 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 NECAB3Q96P71 396 aaPredicted RBP18.6■□□□□ 0.57
PTPRA-206ENST00000430705 AGXT2Q9BYV1 514 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 SLC9A2Q9UBY0 812 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 TUBE1Q9UJT0 475 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 KAT6AQ92794 2004 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 RALGAPA2Q2PPJ7 1873 aa18.6■□□□□ 0.57
PTPRA-206ENST00000430705 TCF20Q9UGU0 1960 aaKnown RBP18.59■□□□□ 0.57
PTPRA-206ENST00000430705 IGLV3-22A0A075B6J6 115 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 FAM86B1E9PN63 330 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 TNFRSF10AO00220 468 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 MEIS1O00470 390 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 CCNE2O96020 404 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 HMGB1P09429 215 aaKnown RBP18.59■□□□□ 0.57
PTPRA-206ENST00000430705 FAM86B2P0C5J1 330 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 GHRP10912 638 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 BMP1P13497 986 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 METAP2P50579 478 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPRA-206ENST00000430705 ACTR2P61160 394 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 AP3B2Q13367 1082 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 TEX2Q8IWB9 1127 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 TRAPPC12Q8WVT3 735 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 GLG1Q92896 1179 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 TOP1MTQ969P6 601 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 IFIH1Q9BYX4 1025 aaKnown RBP18.59■□□□□ 0.57
PTPRA-206ENST00000430705 SMARCAD1Q9H4L7 1026 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 INSL6Q9Y581 213 aa18.59■□□□□ 0.57
PTPRA-206ENST00000430705 FOSP01100 380 aaPredicted RBP18.58■□□□□ 0.56
PTPRA-206ENST00000430705 LINC00271P0C7V0 271 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 SCG2P13521 617 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 INSRRP14616 1297 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 RPS6KB1P23443 525 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 IGBP1P78318 339 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 PLCB4Q15147 1175 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 SKIV2LQ15477 1246 aaKnown RBP18.58■□□□□ 0.56
PTPRA-206ENST00000430705 NTRK3Q16288 839 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 JAKMIP3Q5VZ66 844 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 TAF2Q6P1X5 1199 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 FBXL16Q8N461 479 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 DNAJB3Q8WWF6 145 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 LINC01599Q8WXQ3 324 aa18.58■□□□□ 0.56
PTPRA-206ENST00000430705 UHRF1Q96T88 793 aaPredicted RBP18.58■□□□□ 0.56
PTPRA-206ENST00000430705 RC3H2Q9HBD1 1191 aaKnown RBP18.58■□□□□ 0.56
PTPRA-206ENST00000430705 LOXHD1Q8IVV2 1947 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 IGKV6D-21A0A0A0MT36 114 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 DHX15O43143 795 aaKnown RBP18.57■□□□□ 0.56
PTPRA-206ENST00000430705 ATG7O95352 703 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 FBXO47Q5MNV8 452 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 APBB2Q92870 758 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 PHKBQ93100 1093 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-206ENST00000430705 CDY2AQ9Y6F7 541 aa18.57■□□□□ 0.56
PTPRA-206ENST00000430705 KIAA1671Q9BY89 1806 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 ESYT2A0FGR8 921 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 EDIL3O43854 480 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 PPFIA3O75145 1194 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 UPP2O95045 317 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 BLOC1S2Q6QNY1 142 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 NIPA1Q7RTP0 329 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 UIMC1Q96RL1 719 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 SDF4Q9BRK5 362 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 ZMYND12Q9H0C1 365 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 TSPYL2Q9H2G4 693 aaPredicted RBP18.56■□□□□ 0.56
PTPRA-206ENST00000430705 AGO3Q9H9G7 860 aaKnown RBP18.56■□□□□ 0.56
PTPRA-206ENST00000430705 LMCD1Q9NZU5 365 aa18.56■□□□□ 0.56
PTPRA-206ENST00000430705 BRWD1Q9NSI6 2320 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 DDX39AO00148 427 aaKnown RBP18.55■□□□□ 0.56
PTPRA-206ENST00000430705 MRPS6P82932 125 aaKnown RBP18.55■□□□□ 0.56
PTPRA-206ENST00000430705 EPC2Q52LR7 807 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 PLPPR4Q7Z2D5 763 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 CCDC60Q8IWA6 550 aaPredicted RBP18.55■□□□□ 0.56
PTPRA-206ENST00000430705 FBXO22Q8NEZ5 403 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 RASGRP4Q8TDF6 673 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 YME1L1Q96TA2 773 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 FAM49AQ9H0Q0 323 aaPredicted RBP18.55■□□□□ 0.56
PTPRA-206ENST00000430705 TRPC6Q9Y210 931 aa18.55■□□□□ 0.56
PTPRA-206ENST00000430705 PRPF3O43395 683 aaKnown RBP18.54■□□□□ 0.56
PTPRA-206ENST00000430705 CYP3A4P08684 503 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 EVCP57679 992 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 TMEM62Q0P6H9 643 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 TSHZ1Q6ZSZ6 1077 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 LENG9Q96B70 501 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 GLT8D2Q9H1C3 349 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 NCOA5Q9HCD5 579 aaKnown RBP18.54■□□□□ 0.56
PTPRA-206ENST00000430705 COG5Q9UP83 839 aa18.54■□□□□ 0.56
PTPRA-206ENST00000430705 RRN3P2A6NIE6 340 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 ZBTB42B2RXF5 422 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 ATP4AP20648 1035 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 CD52P31358 61 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 STAT5BP51692 787 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 FGD1P98174 961 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
PTPRA-206ENST00000430705 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
PTPRA-206ENST00000430705 CRIPAKQ8N1N5 446 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms