RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 SCFD2Q8WU76 684 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 LENG9Q96B70 501 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 PBKQ96KB5 322 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 ZIM3Q96PE6 472 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 ANO3Q9BYT9 981 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 FAM107BQ9H098 131 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 NRXN2Q9P2S2 1712 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 A0A0A6YYK5 440 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 GTPBP10A4D1E9 387 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 SLC16A3O15427 465 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 CIITAP33076 1130 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 SLC16A2P36021 539 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 CARSP49589 748 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PICALMQ13492 652 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 KNOP1Q1ED39 458 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 KIAA0753Q2KHM9 967 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 APOBEC3HQ6NTF7 200 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ZBTB9Q96C00 473 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP40Q9NVE5 1235 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 RSPH14Q9UHP6 348 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 HDAC9Q9UKV0 1011 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 INTUQ9ULD6 942 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 SRRM3A6NNA2 597 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 HSPA9P38646 679 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 MATR3P43243 847 aaKnown RBP eCLIP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 NPEPPSP55786 919 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PTK2Q05397 1052 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 EPHA7Q15375 998 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 KDM7AQ6ZMT4 941 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 KCTD1Q719H9 257 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ZNF571Q7Z3V5 609 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 HOMEZQ8IX15 550 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 C10orf67Q8IYJ2 551 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ARL8AQ96BM9 186 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 BORCS6Q96GS4 357 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 NGLY1Q96IV0 654 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 CALR3Q96L12 384 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 FAM20AQ96MK3 541 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PSMB7Q99436 277 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 P2RX7Q99572 595 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PAGR1Q9BTK6 254 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 DNAJC18Q9H819 358 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 SIX2Q9NPC8 291 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ADAMTSL1Q8N6G6 1762 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ANKRD31Q8N7Z5 1873 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 POLRMTO00411 1230 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ONECUT3O60422 494 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 NPM3O75607 178 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 HEXIM1O94992 359 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 AFPP02771 609 aaKnown RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 UCHL3P15374 230 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PON1P27169 355 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 CASP5P51878 434 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 RAPGEF1Q13905 1077 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 USP17L6PQ6QN14 398 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 NELFCDQ8IXH7 590 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 EFCAB13Q8IY85 973 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 FAM133AQ8N9E0 248 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 CASKIN2Q8WXE0 1202 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ISCUQ9H1K1 167 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 EPB41L5Q9HCM4 733 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 TBC1D7Q9P0N9 293 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ADAMTS1Q9UHI8 967 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 STXBP5LQ9Y2K9 1186 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 PCDHA1Q9Y5I3 950 aa8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ZNF646O15015 1829 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-204ENST00000428136 ZNF233A6NK53 670 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 PPEF1O14829 653 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-204ENST00000428136 CALUO43852 315 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-204ENST00000428136 MARCH6O60337 910 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 GFPT2O94808 682 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 FTCDO95954 541 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 HLA-DOAP06340 250 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 CYP3A4P08684 503 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 FAM153BP0C7A2 387 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 NR2F2P24468 414 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 ECHS1P30084 290 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 SREBF1P36956 1147 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 ARHGAP4P98171 946 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 DDR1Q08345 913 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 SLC15A2Q16348 729 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
LRCH3-204ENST00000428136 FAM153CQ494X1 144 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 TATDN1Q6P1N9 297 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 SIAH1Q8IUQ4 282 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 RASGEF1CQ8N431 466 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 OLIG1Q8TAK6 271 aa8.62□□□□□ -1.03
LRCH3-204ENST00000428136 POLR3CQ9BUI4 534 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms