RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HDAC6Q9UBN7 1215 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 RASAL2Q9UJF2 1139 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 THRAP3Q9Y2W1 955 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 NOC2LQ9Y3T9 749 aaKnown RBP6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPEF2Q9C093 1822 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 LRRC37A3O60309 1634 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 DIP2AQ14689 1571 aa6.1□□□□□ -1.43
VTI1BP4-201ENST00000427516 MRC1P22897 1456 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ARHGAP23Q9P227 1491 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 BCL9O00512 1426 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM94Q12767 1356 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PALLDQ8WX93 1383 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PLEKHG1Q9ULL1 1385 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ABCB11O95342 1321 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PDS5AQ29RF7 1337 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 IQCA1LA6NCM1 817 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 KCNJ18B7U540 433 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 IGF2BP3O00425 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ENC1O14682 589 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 LSM1O15116 133 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP9BO43861 1147 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 KDM1AO60341 852 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP2C2O75185 946 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 KRT38O76015 456 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ANXA13P27216 316 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PDIA3P30101 505 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 MLH1P40692 756 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 COPB1P53618 953 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZC3H6P61129 1189 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ERVK-24P63145 666 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 XIAPP98170 497 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 KCNJ12Q14500 433 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 DIXDC1Q155Q3 683 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 CLPPQ16740 277 aaPredicted RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PDCD4Q53EL6 469 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TCP11X2Q5H9J9 407 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 SFMBT2Q5VUG0 894 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 RNF43Q68DV7 783 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ANO7Q6IWH7 933 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 BRICD5Q6PL45 260 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 MAP7D3Q8IWC1 876 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TRIM22Q8IYM9 498 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PROCA1Q8NCQ7 364 aaPredicted RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 LRRC8CQ8TDW0 803 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ASAP3Q8TDY4 903 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 UBLCP1Q8WVY7 318 aaPredicted RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 CLMNQ96JQ2 1002 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TUBGCP5Q96RT8 1024 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 CGREF1Q99674 301 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 FAM167BQ9BTA0 163 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPZ1Q9BXG8 430 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 USP44Q9H0E7 712 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 LRMDAQ9H2I8 198 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 BTBD7Q9P203 1132 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 DNAJB4Q9UDY4 337 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TUBGCP4Q9UGJ1 667 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 SAP30BPQ9UHR5 308 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 CNOT7Q9UIV1 285 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 NFU1Q9UMS0 254 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 G3BP2Q9UN86 482 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 SATB2Q9UPW6 733 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 DIS3Q9Y2L1 958 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 FRMD4BQ9Y2L6 1034 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM98Q9Y2Y6 226 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 UTP11Q9Y3A2 253 aaKnown RBP6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 L3MBTL1Q9Y468 752 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 PIK3C2AO00443 1686 aa6.09□□□□□ -1.43
VTI1BP4-201ENST00000427516 A2ML1A8K2U0 1454 aa6.09□□□□□ -1.44
VTI1BP4-201ENST00000427516 PARP4Q9UKK3 1724 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MROH7-TTC4A0A0A0MT08 1334 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PASKQ96RG2 1323 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 GOLGA8BA8MQT2 603 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 A8MXQ7 604 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SPECC1L-ADORA2AF8WAN1 911 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 MATN2O00339 956 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PSMA7O14818 248 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 OPLAHO14841 1288 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 FOXP2O15409 715 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 P4HA2O15460 535 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 RGS16O15492 202 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 PJA2O43164 708 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 RAD21O60216 631 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 TJP3O95049 919 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 UNC5CO95185 931 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 ZWINTO95229 277 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 LCA5LO95447 670 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 GJB6O95452 261 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 EYA4O95677 639 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 DDX58O95786 925 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 NUDT17P0C025 328 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 FAM163BP0C2L3 166 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 GNAZP19086 355 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 CYP11B2P19099 503 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 POLR2EP19388 210 aaKnown RBP6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 HSD17B3P37058 310 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 SERPINB4P48594 390 aa6.08□□□□□ -1.44
VTI1BP4-201ENST00000427516 FXR1P51114 621 aaKnown RBP eCLIP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms