RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 TRIM68Q6AZZ1 485 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 RCSD1Q6JBY9 416 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 GJB7Q6PEY0 223 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 KRT25Q7Z3Z0 450 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 GLG1Q92896 1179 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 CHMP6Q96FZ7 201 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 INPP4AQ96PE3 977 aaPredicted RBP8.17□□□□□ -1.1
LINC01108-201ENST00000427276 FMO2Q99518 471 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 PAIP2Q9BPZ3 127 aaKnown RBP8.17□□□□□ -1.1
LINC01108-201ENST00000427276 FGFBP2Q9BYJ0 223 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 RAB34Q9BZG1 259 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 PLCB1Q9NQ66 1216 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 INTS9Q9NV88 658 aaKnown RBP8.17□□□□□ -1.1
LINC01108-201ENST00000427276 DNAJC17Q9NVM6 304 aaKnown RBP8.17□□□□□ -1.1
LINC01108-201ENST00000427276 CEP72Q9P209 647 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 ANAPC4Q9UJX5 808 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 BCS1LQ9Y276 419 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 SLIT3O75094 1523 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 TJP1Q07157 1748 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 SSU72P8A0A1W2PR75 194 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 TRIM37O94972 964 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 SLC8A1P32418 973 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 GRB10Q13322 594 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 CCDC50Q8IVM0 306 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 SPDL1Q96EA4 605 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 PRMT1Q99873 361 aaKnown RBP8.17□□□□□ -1.1
LINC01108-201ENST00000427276 TMEM47Q9BQJ4 181 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 IL17RBQ9NRM6 502 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 BARHL2Q9NY43 387 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 CHORDC1Q9UHD1 332 aaPredicted RBP8.17□□□□□ -1.1
LINC01108-201ENST00000427276 KIAA1024Q9UPX6 916 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 PTPN22Q9Y2R2 807 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 PCDHB13Q9Y5F0 798 aa8.17□□□□□ -1.1
LINC01108-201ENST00000427276 ENO4A6NNW6 628 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 CLIC2O15247 247 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 SLC37A4O43826 429 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 KIF1CO43896 1103 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 GFPT2O94808 682 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 SHBGP04278 402 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 PPP1R2P41236 205 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 DENND2CQ68D51 928 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 VPS36Q86VN1 386 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 FAM228AQ86W67 206 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 LRRC34Q8IZ02 419 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 GUF1Q8N442 669 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 PRCCQ92733 491 aaPredicted RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 AK8Q96MA6 479 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 LBHD1Q9BQE6 289 aaPredicted RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 MMTAG2Q9BU76 263 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 CUEDC2Q9H467 287 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 ARPP21Q9UBL0 812 aaPredicted RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 FLT1P17948 1338 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 MEIS1O00470 390 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 CETN3O15182 167 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 DIAPH2O60879 1101 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 NR2F2P24468 414 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 COASYQ13057 564 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 BIRC3Q13489 604 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 MTMR3Q13615 1198 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 CUL1Q13616 776 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 IFI16Q16666 785 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 TRMT1LQ7Z2T5 733 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 YTHDF3Q7Z739 585 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 GPBP1Q86WP2 473 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 GDAP1Q8TB36 358 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 NSUN4Q96CB9 384 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 FAM84BQ96KN1 310 aaPredicted RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 XPO6Q96QU8 1125 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 BLOC1S4Q9NUP1 217 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 TMOD4Q9NZQ9 345 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 SWAP70Q9UH65 585 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 MAD2L2Q9UI95 211 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 DBR1Q9UK59 544 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 PJA2O43164 708 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 ATP6V1G2O95670 118 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 H2AFZP0C0S5 128 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 HIBADHP31937 336 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 HNRNPH3P31942 346 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 IFI35P80217 286 aaPredicted RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 LRRC63Q05C16 580 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 H2AFVQ71UI9 128 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 ZNF571Q7Z3V5 609 aaPredicted RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 ZNF384Q8TF68 577 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 RUBCNQ92622 972 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 CELF1Q92879 486 aaKnown RBP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC01108-201ENST00000427276 OSGEPQ9NPF4 335 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 NR2E1Q9Y466 385 aa8.16□□□□□ -1.1
LINC01108-201ENST00000427276 NID2Q14112 1375 aa8.15□□□□□ -1.1
LINC01108-201ENST00000427276 C1orf167Q5SNV9 1468 aa8.15□□□□□ -1.1
LINC01108-201ENST00000427276 CCT8L1PA6NM43 557 aa8.15□□□□□ -1.1
LINC01108-201ENST00000427276 FGFR4P22455 802 aa8.15□□□□□ -1.1
LINC01108-201ENST00000427276 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.1
LINC01108-201ENST00000427276 ARHGAP44Q17R89 818 aa8.15□□□□□ -1.1
LINC01108-201ENST00000427276 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
LINC01108-201ENST00000427276 RDH13Q8NBN7 331 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms