RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 SNX5Q9Y5X3 404 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 A0A0D9SFI3 127 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 ANP32DO95626 131 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 ZFXP17010 805 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 HSPA6P17066 643 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 HNRNPH2P55795 449 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TTC1Q99614 292 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 L3MBTL1Q9Y468 752 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 USP19O94966 1318 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TNKSO95271 1327 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 ZSCAN9O15535 394 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 KPNA2P52292 529 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TFAMQ00059 246 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 ACTN3Q08043 901 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 DNAJC24Q6P3W2 148 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 PCDHA5Q9Y5H7 936 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 MEIS1O00470 390 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 SUPT3HO75486 399 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 SCARA5Q6ZMJ2 495 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 CRLF3Q8IUI8 442 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 IFNL3Q8IZI9 196 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■■■■ 40.4
HDLBP-214ENST00000427183 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 NFU1Q9UMS0 254 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
HDLBP-214ENST00000427183 DIP2CQ9Y2E4 1556 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 BPIFB4P59827 614 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 MOSPD1Q9UJG1 213 aa13.5□□□□□ -0.25
HDLBP-214ENST00000427183 MROH1Q8NDA8 1641 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 ZNF18P17022 549 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 CLCN6P51797 869 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 DR1Q01658 176 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 C1orf146Q5VVC0 180 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 LZICQ8WZA0 190 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 FMO2Q99518 471 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 FLT4P35916 1363 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 INO80B-WBP1J3KQ70 363 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 PSMC2P35998 433 aaKnown RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 MFSD14BQ5SR56 506 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 F5H423 210 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 CSADQ9Y600 493 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 AOX1Q06278 1338 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 KCNA4P22459 653 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 PDCLQ13371 301 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 CASP8Q14790 479 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 DPCR1Q3MIW9 517 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 C11orf57Q6ZUT1 292 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 ABI1Q8IZP0 508 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 STX18Q9P2W9 335 aaKnown RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 FAM95CA0A1B0GW59 222 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 TMEM232C9JQI7 657 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 KLC3Q6P597 504 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
HDLBP-214ENST00000427183 NRBP2Q9NSY0 501 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 SUN2Q9UH99 717 aa13.49□□□□□ -0.25
HDLBP-214ENST00000427183 E9PMD0 336 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 GYG1P46976 350 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 MRPS15P82914 257 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 GAS2L3Q86XJ1 694 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 GANCQ8TET4 914 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 LGR6Q9HBX8 967 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 FGFR1OP2Q9NVK5 253 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 UBN2Q6ZU65 1347 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 RNF103-CHMP3A0A140T963 221 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 H0YCG3 227 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 PPIP5K2O43314 1243 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 ERFP50548 548 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 SPICE1Q8N0Z3 855 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 NHEJ1Q9H9Q4 299 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 ZNF229Q9UJW7 825 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 PLAAQ9Y263 795 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 HNRNPCP07910 306 aaKnown RBP eCLIP13.48□□□□□ -0.258e-8■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms