RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 AASDHPPTQ9NRN7 309 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 TOPORSQ9NS56 1045 aaPredicted RBP3.93□□□□□ -1.78
TOP2A-201ENST00000423485 VPS4AQ9UN37 437 aa3.93□□□□□ -1.78
TOP2A-201ENST00000423485 DLX3O60479 287 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 YBX3P16989 372 aaKnown RBP eCLIP3.92□□□□□ -1.783e-9■□□□□ 10.3
TOP2A-201ENST00000423485 CCDC173Q0VFZ6 552 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 STAT4Q14765 748 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 LLGL1Q15334 1064 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 PTGISQ16647 500 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 HFE2Q6ZVN8 426 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SPATA2LQ8IUW3 424 aaPredicted RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 LPIN2Q92539 896 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 CALML4Q96GE6 196 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SPATA33Q96N06 139 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 LMAN2LQ9H0V9 348 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 TMEM260Q9NX78 707 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 GDF11O95390 407 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 NAPAP54920 295 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 PPFIA1Q13136 1202 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 FGL2Q14314 439 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 NOL9Q5SY16 702 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 RNF207Q6ZRF8 634 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 UBALD2Q8IYN6 164 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 FNBP1Q96RU3 617 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 TSG101Q99816 390 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 PANK2Q9BZ23 570 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 PHAXQ9H814 394 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 ZSWIM6Q9HCJ5 1215 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 BABAM1Q9NWV8 329 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 BCORQ6W2J9 1755 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 ABCA3Q99758 1704 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SYNGAP1Q96PV0 1343 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 ZNF213O14771 459 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 MMP3P08254 477 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 KRT13P13646 458 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 PDE6AP16499 860 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 MRE11P49959 708 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 RRP1P56182 461 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 CTSWP56202 376 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 RARS2Q5T160 578 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 IFIT1BQ5T764 474 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 ZKSCAN2Q63HK3 967 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 KIAA2013Q8IYS2 634 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 TMTC2Q8N394 836 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC94Q9BW85 323 aaPredicted RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 EPS8L2Q9H6S3 715 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 RPAP3Q9H6T3 665 aaPredicted RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 STRIP2Q9ULQ0 834 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 COLQQ9Y215 455 aaPredicted RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 ATRNO75882 1429 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 TMX2-CTNND1H3BSU7 103 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 CAMTA2O94983 1202 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 PDIA4P13667 645 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 STAT1P42224 750 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SCNN1BP51168 640 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SLFN5Q08AF3 891 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SCGB2A2Q13296 93 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 KIAA1324Q6UXG2 1013 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 RASAL3Q86YV0 1011 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 GABPB2Q8TAK5 448 aaPredicted RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 ERCC4Q92889 916 aaPredicted RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 BADQ92934 168 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 C1QTNF7Q9BXJ2 289 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 DDX41Q9UJV9 622 aaKnown RBP3.92□□□□□ -1.78
TOP2A-201ENST00000423485 FBXO10Q9UK96 956 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 TMX2Q9Y320 296 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 SLC12A7Q9Y666 1083 aa3.92□□□□□ -1.78
TOP2A-201ENST00000423485 TMEM232C9JQI7 657 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SUN1O94901 812 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CNPP09543 421 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 GNA11P29992 359 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 STAT2P52630 851 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 POLGP54098 1239 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ASIC1P78348 528 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 LACTBP83111 547 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CRHR2Q13324 411 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PCNX4Q63HM2 1172 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SLFN13Q68D06 897 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 GET4Q7L5D6 327 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DHX32Q7L7V1 743 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CNNM3Q8NE01 707 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 E2F7Q96AV8 911 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 EFHD1Q9BUP0 239 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SNX25Q9H3E2 840 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 UBN1Q9NPG3 1134 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PRDM6Q9NQX0 595 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ITGB1BP2Q9UKP3 347 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 USTQ9Y2C2 406 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC169A6NNP5 214 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 H3BM21 787 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 LRCH4O75427 683 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ERN1O75460 977 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 WASHC5Q12768 1159 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 LAMC2Q13753 1193 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 KCNB1Q14721 858 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 C16orf72Q14CZ0 275 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 KYNUQ16719 465 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ARSJQ5FYB0 599 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 MUM1L1Q5H9M0 696 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TAS1R3Q7RTX0 852 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms