RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 B4DLN1 442 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 NIM1KQ8IY84 436 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 CYP2W1Q8TAV3 490 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
CHRD-204ENST00000420973 HOMER3Q9NSC5 361 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 HDAC9Q9UKV0 1011 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 PPP1R3GB7ZBB8 358 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 AKR1B15C9JRZ8 316 aaPredicted RBP15.88■□□□□ 0.13
CHRD-204ENST00000420973 ZBTB5O15062 677 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 ARHGAP6O43182 974 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 KRT9P35527 623 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 PNMA8AQ86V59 439 aaPredicted RBP15.88■□□□□ 0.13
CHRD-204ENST00000420973 GLIS3Q8NEA6 775 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 SLF1Q9BQI6 1058 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 CDC23Q9UJX2 597 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 SFI1A8K8P3 1242 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
CHRD-204ENST00000420973 ACBD5Q5T8D3 534 aaPredicted RBP15.88■□□□□ 0.13
CHRD-204ENST00000420973 FAM81AQ8TBF8 368 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 OSBPL9Q96SU4 736 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 GLIS2Q9BZE0 524 aaPredicted RBP15.88■□□□□ 0.13
CHRD-204ENST00000420973 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 RMND1Q9NWS8 449 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 TRPC6Q9Y210 931 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 SNED1Q8TER0 1413 aa15.88■□□□□ 0.13
CHRD-204ENST00000420973 POTEB3A0JP26 581 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 POTECB2RU33 542 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 PDXDC2PQ6P474 469 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 POTEBQ6S5H4 581 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 HHIPL2Q6UWX4 724 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 TRIM58Q8NG06 486 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 STAMBPL1Q96FJ0 436 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
CHRD-204ENST00000420973 RAB34Q9BZG1 259 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 MMADHCQ9H3L0 296 aaPredicted RBP15.87■□□□□ 0.13
CHRD-204ENST00000420973 FAM207AQ9NSI2 230 aaPredicted RBP15.87■□□□□ 0.13
CHRD-204ENST00000420973 SWAP70Q9UH65 585 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 ATP6V1G1O75348 118 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 NAALADL2Q58DX5 795 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 KCTD16Q68DU8 428 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
CHRD-204ENST00000420973 FBXO11Q86XK2 927 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 LRRC15Q8TF66 581 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHRD-204ENST00000420973 PCDHGA4Q9Y5G9 962 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 KLK7P49862 253 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 BPIFA3Q9BQP9 254 aa15.87■□□□□ 0.13
CHRD-204ENST00000420973 RGL2O15211 777 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 BMP3P12645 472 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 CDCA2Q69YH5 1023 aaPredicted RBP15.86■□□□□ 0.13
CHRD-204ENST00000420973 C15orf52Q6ZUT6 534 aaKnown RBP15.86■□□□□ 0.13
CHRD-204ENST00000420973 SAMD7Q7Z3H4 446 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 KCNK18Q7Z418 384 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 SH3GLB2Q9NR46 395 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 POTEFA5A3E0 1075 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 OPLAHO14841 1288 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 SARSP49591 514 aaKnown RBP15.86■□□□□ 0.13
CHRD-204ENST00000420973 HERC4Q5GLZ8 1057 aaPredicted RBP15.86■□□□□ 0.13
CHRD-204ENST00000420973 GPATCH4Q5T3I0 446 aaKnown RBP15.86■□□□□ 0.13
CHRD-204ENST00000420973 POTEGQ6S5H5 508 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 POTEEQ6S8J3 1075 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 ZDHHC15Q96MV8 337 aa15.86■□□□□ 0.13
CHRD-204ENST00000420973 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
CHRD-204ENST00000420973 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 MYL1P05976 194 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 FXR1P51114 621 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHRD-204ENST00000420973 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 GABPAQ06546 454 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 RRP1BQ14684 758 aaKnown RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 ZNF658Q5TYW1 1059 aaPredicted RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 TCERG1LQ5VWI1 586 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 ARL6IP4Q66PJ3 421 aaKnown RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 TRIML1Q8N9V2 468 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 PLEKHG4BQ96PX9 1271 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 PHACTR1Q9C0D0 580 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 RAB21Q9UL25 225 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 CTAGE9A4FU28 777 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 KCNJ6P48051 423 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 C4orf32Q8N8J7 132 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 LARP4BQ92615 738 aaKnown RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 ANO3Q9BYT9 981 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 HPCAL4Q9UM19 191 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 GUCA1BQ9UMX6 200 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 TRAF5O00463 557 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 PRPF6O94906 941 aaKnown RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■□□□□ 10.9
CHRD-204ENST00000420973 NOA1Q8NC60 698 aaKnown RBP15.85■□□□□ 0.13
CHRD-204ENST00000420973 HOOK2Q96ED9 719 aa15.85■□□□□ 0.13
CHRD-204ENST00000420973 CLTAP09496 248 aa15.84■□□□□ 0.13
CHRD-204ENST00000420973 IMPDH2P12268 514 aa15.84■□□□□ 0.13
CHRD-204ENST00000420973 ERCC5P28715 1186 aaPredicted RBP15.84■□□□□ 0.13
CHRD-204ENST00000420973 AMPD3Q01432 767 aa15.84■□□□□ 0.13
CHRD-204ENST00000420973 TRIM68Q6AZZ1 485 aa15.84■□□□□ 0.13
CHRD-204ENST00000420973 PIGOQ8TEQ8 1089 aa15.84■□□□□ 0.13
CHRD-204ENST00000420973 TCP11Q8WWU5 503 aa15.84■□□□□ 0.13
CHRD-204ENST00000420973 CCDC17Q96LX7 622 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms