RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 APBB2Q92870 758 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 HCSTQ9UBK5 93 aa14.83□□□□□ -0.04
LINC00339-203ENST00000420503 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-203ENST00000420503 ERICH2A1L162 156 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 MBTPS2O43462 519 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 RBM10P98175 930 aaKnown RBP14.82□□□□□ -0.04
LINC00339-203ENST00000420503 PAN2Q504Q3 1202 aaKnown RBP14.82□□□□□ -0.04
LINC00339-203ENST00000420503 ADHFE1Q8IWW8 467 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 ZNF689Q96CS4 500 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-203ENST00000420503 PGBD1Q96JS3 809 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 PHOX2BQ99453 314 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 SPZ1Q9BXG8 430 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 TUBE1Q9UJT0 475 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 NRCAMQ92823 1304 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 PLXNA4Q9HCM2 1894 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 ZDBF2Q9HCK1 2354 aa14.82□□□□□ -0.04
LINC00339-203ENST00000420503 MBLAC1A4D2B0 266 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-203ENST00000420503 PIK3CDO00329 1044 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 STAM2O75886 525 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 DGKIO75912 1065 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 ITGB1P05556 798 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 GNAT1P11488 350 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 ALADP13716 330 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-203ENST00000420503 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 CCDC82Q8N4S0 544 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 CYP2W1Q8TAV3 490 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
LINC00339-203ENST00000420503 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
LINC00339-203ENST00000420503 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-203ENST00000420503 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
LINC00339-203ENST00000420503 UBIAD1Q9Y5Z9 338 aa14.81□□□□□ -0.04
LINC00339-203ENST00000420503 SGSM2O43147 1006 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 INSRRP14616 1297 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 MRPS6P82932 125 aaKnown RBP14.8□□□□□ -0.04
LINC00339-203ENST00000420503 NHLH1Q02575 133 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 SMAD2Q15796 467 aaKnown RBP14.8□□□□□ -0.04
LINC00339-203ENST00000420503 CSPP1Q1MSJ5 1256 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
LINC00339-203ENST00000420503 TYW1BQ6NUM6 668 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 TAF2Q6P1X5 1199 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 NLRX1Q86UT6 975 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 GLG1Q92896 1179 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 CUL5Q93034 780 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 GPRASP2Q96D09 838 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 TMX1Q9H3N1 280 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 CLEC1BQ9P126 229 aa14.8□□□□□ -0.04
LINC00339-203ENST00000420503 SH2B2O14492 632 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-203ENST00000420503 PRC1O43663 620 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 GLP2RO95838 553 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 MMP1P03956 469 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 MRE11P49959 708 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 RBM23Q86U06 439 aaKnown RBP14.79□□□□□ -0.04
LINC00339-203ENST00000420503 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 KLHL23Q8NBE8 558 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 CTCFLQ8NI51 663 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-203ENST00000420503 SEPT1Q8WYJ6 367 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 PSTPIP2Q9H939 334 aa14.79□□□□□ -0.04
LINC00339-203ENST00000420503 BARX2Q9UMQ3 279 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-203ENST00000420503 MGEA5O60502 916 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 DDAH1O94760 285 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 RB1P06400 928 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 ARP10275 920 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 IRX6P78412 446 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-203ENST00000420503 TRAF1Q13077 416 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 ADAM15Q13444 863 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 SMAD4Q13485 552 aaKnown RBP14.78□□□□□ -0.04
LINC00339-203ENST00000420503 MTMR1Q13613 665 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 SART3Q15020 963 aaKnown RBP14.78□□□□□ -0.04
LINC00339-203ENST00000420503 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 SPPL3Q8TCT6 385 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 MAP4K1Q92918 833 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 MSLNLQ96KJ4 702 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 CDHR5Q9HBB8 845 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 JADE2Q9NQC1 790 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 ERAP1Q9NZ08 941 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 PRKAG3Q9UGI9 489 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 SEC63Q9UGP8 760 aaKnown RBP14.78□□□□□ -0.04
LINC00339-203ENST00000420503 CD207Q9UJ71 328 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 PCDHA6Q9UN73 950 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 PCDHA8Q9Y5H6 950 aa14.78□□□□□ -0.04
LINC00339-203ENST00000420503 EVPLQ92817 2033 aa14.77□□□□□ -0.04
LINC00339-203ENST00000420503 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 PPFIA3O75145 1194 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 NRIP1P48552 1158 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 ITGB3BPQ13352 177 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-203ENST00000420503 AAMPQ13685 434 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 IER5LQ5T953 404 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 XRRA1Q6P2D8 792 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 NFXL1Q6ZNB6 911 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 VN1R2Q8NFZ6 395 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 LMAN2LQ9H0V9 348 aa14.77□□□□□ -0.05
LINC00339-203ENST00000420503 PADI3Q9ULW8 664 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms