RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TRIM9Q9C026 710 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 ANO10Q9NW15 660 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 DBR1Q9UK59 544 aaKnown RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 KIAA1024Q9UPX6 916 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 CENPFP49454 3210 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 POTEB3A0JP26 581 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 TNPO2O14787 897 aaKnown RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 UBA1P22314 1058 aaKnown RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 SLC12A3P55017 1021 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 SOX10P56693 466 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 PSMC5P62195 406 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 TYRO3Q06418 890 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 PNOCQ13519 176 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 CELF3Q5SZQ8 465 aaKnown RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 IQSEC1Q6DN90 963 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 POTEBQ6S5H4 581 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 KCNK18Q7Z418 384 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 TRMT44Q8IYL2 757 aaKnown RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 NPLOC4Q8TAT6 608 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 BPIFA3Q9BQP9 254 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 RMND1Q9NWS8 449 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 ZNFX1Q9P2E3 1918 aaKnown RBP15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 PSAPP07602 524 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 NLRP12P59046 1061 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 ACTR2P61160 394 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 MORC3Q14149 939 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 STX1AQ16623 288 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 COBLL1Q53SF7 1204 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 SEPT14Q6ZU15 432 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 AFAP1L1Q8TED9 768 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 DYDC2Q96IM9 177 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 LXNQ9BS40 222 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 TSPY26PQ9H489 355 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 RGL1Q9NZL6 768 aa15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 MAFBQ9Y5Q3 323 aaPredicted RBP15.93■□□□□ 0.14
SHMT1P1-201ENST00000419974 FRMD3A2A2Y4 597 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 RHOBTB3O94955 611 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 SUPT20HL2P0C7V6 817 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 PLA2G4BP0C869 781 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 CTGFP29279 349 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 PSMC4P43686 418 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 EHHADHQ08426 723 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 ACVR2BQ13705 512 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 LAMC2Q13753 1193 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 MIS18BP1Q6P0N0 1132 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 MLKLQ8NB16 471 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 SEPT1Q8WYJ6 367 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 ATP6V0A1Q93050 837 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 TIPINQ9BVW5 301 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 BMP2KQ9NSY1 1161 aaPredicted RBP15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 ANKEF1Q9NU02 776 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 Q9Y3F1 56 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 PPME1Q9Y570 386 aa15.92■□□□□ 0.14
SHMT1P1-201ENST00000419974 KIAA1217Q5T5P2 1943 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 IGSF9BQ9UPX0 1349 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 POTEFA5A3E0 1075 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 CHMP2AO43633 222 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 KLRC4O43908 158 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 LGR5O75473 907 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 ARIH2O95376 493 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 HOXD8P13378 290 aaPredicted RBP15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 HOXD10P28358 340 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 SLC26A2P50443 739 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 CUL4BQ13620 913 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 MCM6Q14566 821 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 DUSP28Q4G0W2 176 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 POTEGQ6S5H5 508 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 CYFIP1Q7L576 1253 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 GAS2L3Q86XJ1 694 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 TPH2Q8IWU9 490 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 FBXO16Q8IX29 292 aaPredicted RBP15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 DNAJC19Q96DA6 116 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 TRIM47Q96LD4 638 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 MAN1B1Q9UKM7 699 aa15.91■□□□□ 0.14
SHMT1P1-201ENST00000419974 PLXNA1Q9UIW2 1896 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 MYMKA6NI61 221 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 STBD1O95210 358 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 GGPS1O95749 300 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 RPN1P04843 607 aaKnown RBP15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 TXNP10599 105 aaKnown RBP15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 CYP11B2P19099 503 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 GUCY2CP25092 1073 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 PPP1R2P41236 205 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 AFMP43652 599 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 PSMD2Q13200 908 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 CTTNQ14247 550 aaKnown RBP15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 UNC13DQ70J99 1090 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 PLPPR4Q7Z2D5 763 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 GPR20Q99678 358 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 ARHGAP39Q9C0H5 1083 aa15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 NAT10Q9H0A0 1025 aaKnown RBP15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 WRAP73Q9P2S5 460 aaPredicted RBP15.9■□□□□ 0.14
SHMT1P1-201ENST00000419974 TNRC18O15417 2968 aaPredicted RBP15.89■□□□□ 0.13
SHMT1P1-201ENST00000419974 EMSYQ7Z589 1322 aa15.89■□□□□ 0.13
SHMT1P1-201ENST00000419974 GSTTP1A0A1W2PQM5 241 aa15.89■□□□□ 0.13
SHMT1P1-201ENST00000419974 E9PMD0 336 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms