RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 AKAP17AQ02040 695 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 JAKMIP3Q5VZ66 844 aa20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 ZMYND12Q9H0C1 365 aa20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 AGO4Q9HCK5 861 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 TUBE1Q9UJT0 475 aa20.05■□□□□ 0.8
PDLIM2-208ENST00000416159 PRUNE2Q8WUY3 3088 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 LINC01553A4QN01 128 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 CHRNA1P02708 482 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 RPLP2P05387 115 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 NEFLP07196 543 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 CYP3A4P08684 503 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 GNA11P29992 359 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 STAT5BP51692 787 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 GRB10Q13322 594 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 PKN1Q16512 942 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 RUFY4Q6ZNE9 571 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 PLPPR4Q7Z2D5 763 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 ASB2Q96Q27 587 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 OSBPL7Q9BZF2 842 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 LMCD1Q9NZU5 365 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 EYSQ5T1H1 3165 aa20.04■□□□□ 0.8
PDLIM2-208ENST00000416159 ATG7O95352 703 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 INSRRP14616 1297 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 EVCP57679 992 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 HTRA4P83105 476 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 ITGB3BPQ13352 177 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 MARCH8Q5T0T0 291 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 SPRED2Q7Z698 418 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 TOP1MTQ969P6 601 aa20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 RNF26Q9BY78 433 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 IFIH1Q9BYX4 1025 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-208ENST00000416159 LPXNO60711 386 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 IGBP1P78318 339 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 MGAT3Q09327 533 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 PLCB4Q15147 1175 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 SKIV2LQ15477 1246 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 NTRK3Q16288 839 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 REXO1Q8N1G1 1221 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 DNAJB3Q8WWF6 145 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 CRYGNQ8WXF5 182 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 PHKBQ93100 1093 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 TRPC6Q9Y210 931 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 CHD7Q9P2D1 2997 aa20.02■□□□□ 0.8
PDLIM2-208ENST00000416159 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 FAM86B1E9PN63 330 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 RBAK-RBAKDNI3L0D1 243 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 FAM86B2P0C5J1 330 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 IFNAR1P17181 557 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 PDIA3P30101 505 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 SLC26A2P50443 739 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 KRT40Q6A162 431 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 CCDC148Q8NFR7 591 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 SP7Q8TDD2 431 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 SUGCTQ9HAC7 445 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
PDLIM2-208ENST00000416159 IGKV6D-21A0A0A0MT36 114 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 DDX39AO00148 427 aaKnown RBP20■□□□□ 0.79
PDLIM2-208ENST00000416159 GHRP10912 638 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 MRPS6P82932 125 aaKnown RBP20■□□□□ 0.79
PDLIM2-208ENST00000416159 SETQ01105 290 aaPredicted RBP20■□□□□ 0.79
PDLIM2-208ENST00000416159 AAK1Q2M2I8 961 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 IER5Q5VY09 327 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 FAM160B1Q5W0V3 765 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 ABHD15Q6UXT9 468 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 IL27Q8NEV9 243 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 SAMD11Q96NU1 681 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 YME1L1Q96TA2 773 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 SLC26A6Q9BXS9 759 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 MTUS1Q9ULD2 1270 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 COG5Q9UP83 839 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 PCDHA2Q9Y5H9 948 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 CYP46A1Q9Y6A2 500 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 CDY2AQ9Y6F7 541 aa20■□□□□ 0.79
PDLIM2-208ENST00000416159 IGLV3-22A0A075B6J6 115 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 POTEB3A0JP26 581 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 UPP2O95045 317 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 CCT2P78371 535 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 LPIN1Q14693 890 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 FBXO47Q5MNV8 452 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 POTEBQ6S5H4 581 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 GDPD5Q8WTR4 605 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 ZNF577Q9BSK1 485 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 TM6SF1Q9BZW5 370 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 TBC1D22BQ9NU19 505 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 SQORQ9Y6N5 450 aa19.99■□□□□ 0.79
PDLIM2-208ENST00000416159 SIP14410 1827 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 M0QZ92 97 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 IPO5O00410 1097 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 BACH1O14867 736 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 ADAMTS3O15072 1205 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 DHX15O43143 795 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 HBP1O60381 514 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 CCNE2O96020 404 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 TOB2Q14106 344 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 MIS18BP1Q6P0N0 1132 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 TSHZ1Q6ZSZ6 1077 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 NME8Q8N427 588 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms