RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 STRCQ7RTU9 1775 aa6.43□□□□□ -1.38
PTPRK-209ENST00000415046 ZMYM3Q14202 1370 aa6.43□□□□□ -1.38
PTPRK-209ENST00000415046 HFM1A2PYH4 1435 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 LMTK3Q96Q04 1460 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 ITGB3P05106 788 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 ARID5AQ03989 594 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 RGL3Q3MIN7 710 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 HHIPL2Q6UWX4 724 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 MCF2L2Q86YR7 1114 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 SYNMO15061 1565 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 SPATA31D1Q6ZQQ2 1576 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 UHRF1BP1Q6BDS2 1440 aa6.42□□□□□ -1.38
PTPRK-209ENST00000415046 ERVK-7P63135 1459 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 LMTK2Q8IWU2 1503 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 HGSO14964 777 aaPredicted RBP6.41□□□□□ -1.38
PTPRK-209ENST00000415046 PPP2R2AP63151 447 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 NKX3-2P78367 333 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 MAP4K2Q12851 820 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 ADAM9Q13443 819 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 STEAP3Q658P3 488 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 GGNQ86UU5 652 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 STK32CQ86UX6 486 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 RBM15Q96T37 977 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTPRK-209ENST00000415046 YIPF4Q9BSR8 244 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 EPB41L1Q9H4G0 881 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 DTLQ9NZJ0 730 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 PCDHB4Q9Y5E5 795 aa6.41□□□□□ -1.38
PTPRK-209ENST00000415046 UGGT1Q9NYU2 1555 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 TCRBV5S2A0A599 114 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 AGRPO00253 132 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 TADA3O75528 432 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 GRIA2P42262 883 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 HSPA2P54652 639 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 ZNF827Q17R98 1081 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 ARRDC4Q8NCT1 418 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPRK-209ENST00000415046 CLDND1Q9NY35 253 aa6.4□□□□□ -1.38
PTPRK-209ENST00000415046 NUP155O75694 1391 aa6.4□□□□□ -1.39
PTPRK-209ENST00000415046 TNRQ92752 1358 aa6.4□□□□□ -1.39
PTPRK-209ENST00000415046 NPATQ14207 1427 aa6.4□□□□□ -1.39
PTPRK-209ENST00000415046 CLTCL1P53675 1640 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 DGKIO75912 1065 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 ZNF28P17035 718 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 MAGEA10P43363 369 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-209ENST00000415046 KIAA2012Q0VF49 1180 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 LGI4Q8N135 537 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 CELF2-AS1Q8N7Q2 184 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 TXNDC5Q8NBS9 432 aaKnown RBP6.39□□□□□ -1.39
PTPRK-209ENST00000415046 HNRNPLLQ8WVV9 542 aaKnown RBP6.39□□□□□ -1.39
PTPRK-209ENST00000415046 KCTD13Q8WZ19 329 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
PTPRK-209ENST00000415046 CHAMP1Q96JM3 812 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 SETD5Q9C0A6 1442 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 A2ML1A8K2U0 1454 aa6.39□□□□□ -1.39
PTPRK-209ENST00000415046 A0A1W2PQU0 124 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 MROH6A6NGR9 719 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 PLATP00750 562 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 DDR2Q16832 855 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 TBC1D10BQ4KMP7 808 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-209ENST00000415046 MCTP2Q6DN12 878 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 BORAQ6PGQ7 559 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 TEPPQ6URK8 271 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 NPM2Q86SE8 214 aaKnown RBP6.38□□□□□ -1.39
PTPRK-209ENST00000415046 FAM124AQ86V42 546 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 PHOSPHO1Q8TCT1 267 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 GPR27Q9NS67 375 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 MYOTQ9UBF9 498 aa6.38□□□□□ -1.39
PTPRK-209ENST00000415046 KDM5AP29375 1690 aaKnown RBP6.38□□□□□ -1.39
PTPRK-209ENST00000415046 IQGAP1P46940 1657 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 ADGRB3O60242 1522 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 ARHGAP31Q2M1Z3 1444 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 RAB3GAP2Q9H2M9 1393 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 DDX3XO00571 662 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRK-209ENST00000415046 DNAJA1P31689 397 aaKnown RBP6.37□□□□□ -1.39
PTPRK-209ENST00000415046 CYP4F22Q6NT55 531 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 GMLQ99445 158 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 IER2Q9BTL4 223 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 SMPD4Q9NXE4 827 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 HSPBP1Q9NZL4 362 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 INVSQ9Y283 1065 aa6.37□□□□□ -1.39
PTPRK-209ENST00000415046 R3HCC1Q9Y3T6 440 aaKnown RBP6.37□□□□□ -1.39
PTPRK-209ENST00000415046 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
PTPRK-209ENST00000415046 PPLO60437 1756 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 TMEM131LA2VDJ0 1609 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 RPRD2Q5VT52 1461 aaKnown RBP6.36□□□□□ -1.39
PTPRK-209ENST00000415046 NLRP1Q9C000 1473 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 DLX3O60479 287 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 MAFKO60675 156 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 LRG1P02750 347 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 ADAM17P78536 824 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 ZXDCQ2QGD7 858 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-209ENST00000415046 RSPO2Q6UXX9 243 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-209ENST00000415046 ANKS3Q6ZW76 656 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 TTC9BQ8N6N2 239 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 SLC43A3Q8NBI5 491 aa6.36□□□□□ -1.39
PTPRK-209ENST00000415046 LCORQ96JN0 433 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-209ENST00000415046 ZSWIM3Q96MP5 696 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms