RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 GDF3Q9NR23 364 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 HSF2BPO75031 334 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 HEXIM1O94992 359 aaKnown RBP16.44■□□□□ 0.22
TTC39A-208ENST00000413473 GIT2Q14161 759 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 SLFN13Q68D06 897 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 CCDC17Q96LX7 622 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 MBOAT7Q96N66 472 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 RUFY1Q96T51 708 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 KRT12Q99456 494 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 GRID2IPA4D2P6 1211 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 SNAP25P60880 206 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 PTK2Q05397 1052 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 SLC20A2Q08357 652 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 SPIRE1Q08AE8 756 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 IRF2BP2Q7Z5L9 587 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 TEKT1Q969V4 418 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 CAPS2Q9BXY5 557 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 ARMCX3Q9UH62 379 aaPredicted RBP16.44■□□□□ 0.22
TTC39A-208ENST00000413473 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
TTC39A-208ENST00000413473 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-208ENST00000413473 POLRMTO00411 1230 aaKnown RBP16.43■□□□□ 0.22
TTC39A-208ENST00000413473 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 CACNB3P54284 484 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 DPY19L2P1Q6NXN4 242 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 ETNPPLQ8TBG4 499 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 ZIM3Q96PE6 472 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 SPAG5Q96R06 1193 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 EHD4Q9H223 541 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 POLD4Q9HCU8 107 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 FAM153AQ9UHL3 310 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 EP400Q96L91 3159 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 SPATA31C1P0DKV0 1188 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 HOXD13P35453 343 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 TCP10Q12799 353 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
TTC39A-208ENST00000413473 TTMPQ5BVD1 217 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 DNAJC21Q5F1R6 531 aaKnown RBP16.43■□□□□ 0.22
TTC39A-208ENST00000413473 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-208ENST00000413473 FRMD5Q7Z6J6 570 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 INPP4AQ96PE3 977 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-208ENST00000413473 REEP2Q9BRK0 252 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 TRAF3IP3Q9Y228 551 aa16.43■□□□□ 0.22
TTC39A-208ENST00000413473 SLC26A4O43511 780 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 EPB41P11171 864 aaKnown RBP16.42■□□□□ 0.22
TTC39A-208ENST00000413473 UCHL3P15374 230 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 NNTQ13423 1086 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 DNAAF5Q86Y56 855 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 SYT2Q8N9I0 419 aaPredicted RBP16.42■□□□□ 0.22
TTC39A-208ENST00000413473 CRYGNQ8WXF5 182 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 MKL1Q969V6 931 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 C10orf71Q711Q0 1435 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
TTC39A-208ENST00000413473 MYBP10242 640 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 RPA1P27694 616 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 TRADDQ15628 312 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 TTC19Q6DKK2 380 aaPredicted RBP16.42■□□□□ 0.22
TTC39A-208ENST00000413473 MOXD1Q6UVY6 613 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 ERMNQ8TAM6 284 aa16.42■□□□□ 0.22
TTC39A-208ENST00000413473 KRT14P02533 472 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 PON1P27169 355 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 PAK2Q13177 524 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 EXOC3L4Q17RC7 722 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 CERKLQ49MI3 558 aaPredicted RBP16.41■□□□□ 0.22
TTC39A-208ENST00000413473 DCAF4Q8WV16 495 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 CCDC43Q96MW1 224 aaKnown RBP16.41■□□□□ 0.22
TTC39A-208ENST00000413473 GOLPH3Q9H4A6 298 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 RABEP2Q9H5N1 569 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 PLCB1Q9NQ66 1216 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 FAM86B1E9PN63 330 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 AKAP3O75969 853 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 FAM86B2P0C5J1 330 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 GUCY2FP51841 1108 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 RPS6KA1Q15418 735 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 USH1GQ495M9 461 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
TTC39A-208ENST00000413473 IQCKQ8N0W5 287 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 CASKIN2Q8WXE0 1202 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 TAF4BQ92750 862 aa16.41■□□□□ 0.22
TTC39A-208ENST00000413473 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
TTC39A-208ENST00000413473 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 G3V3G9 751 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 KCNK3O14649 394 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 XRCC5P13010 732 aaKnown RBP16.4■□□□□ 0.22
TTC39A-208ENST00000413473 NOP2P46087 812 aaKnown RBP16.4■□□□□ 0.22
TTC39A-208ENST00000413473 GNGT1P63211 74 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 CFAP58Q5T655 872 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 DCAF8Q5TAQ9 597 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 TCERG1LQ5VWI1 586 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 KCTD16Q68DU8 428 aa16.4■□□□□ 0.22
TTC39A-208ENST00000413473 GBP6Q6ZN66 633 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms