RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 NR2E1Q9Y466 385 aa-0.6□□□□□ -2.51
MIR548F3-201ENST00000408509 A0A0B4J293 547 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 PRAMEF27A3QJZ7 478 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 CRLF1O75462 422 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 KLHL18O94889 574 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 CST3P01034 146 aaPredicted RBP-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 ZNF883P0CG24 379 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 GLI4P10075 376 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 MPGP29372 298 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 RRP1P56182 461 aaKnown RBP-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 MPP3Q13368 585 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 RBM39Q14498 530 aaKnown RBP-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 USP10Q14694 798 aaKnown RBP-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 MAP1SQ66K74 1059 aaPredicted RBP-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 PI16Q6UXB8 463 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 GPR152Q8TDT2 470 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 RNF31Q96EP0 1072 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 EGFL8Q99944 293 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 DPH2Q9BQC3 489 aaPredicted RBP-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 DLGAP2Q9P1A6 1054 aa-0.61□□□□□ -2.51
MIR548F3-201ENST00000408509 TESPA1A2RU30 521 aaPredicted RBP-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 LGR5O75473 907 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 FOXH1O75593 365 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 ZBTB7AO95365 584 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 EDN3P14138 238 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 PRPH2P23942 346 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 XGP55808 180 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 IRX6P78412 446 aaPredicted RBP-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 RESTQ13127 1097 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 RIN1Q13671 783 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 NFATC4Q14934 902 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 SUPT20HL1Q3ZLR7 823 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 CCDC102BQ68D86 513 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 GPR149Q86SP6 731 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 ETFBKMTQ8IXQ9 262 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 CPT1CQ8TCG5 803 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 TMEM79Q9BSE2 394 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 RPS10P5Q9NQ39 176 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 SH3BP1Q9Y3L3 701 aa-0.62□□□□□ -2.51
MIR548F3-201ENST00000408509 EREGO14944 169 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 POLD1P28340 1107 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 TNFRSF8P28908 595 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 KRT9P35527 623 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 CAP2P40123 477 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 RRADP55042 308 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 MLLT10P55197 1068 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 SLC10A2Q12908 348 aaPredicted RBP-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 DSC3Q14574 896 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 INPP5JQ15735 1006 aaPredicted RBP-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 FAM214AQ32MH5 1076 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 PDE12Q6L8Q7 609 aaKnown RBP-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 CABP7Q86V35 215 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 LINC00116Q8NCU8 138 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 TMEM52Q8NDY8 209 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 DNAJB8Q8NHS0 232 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 NKD1Q969G9 470 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 PMEPA1Q969W9 287 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 ARMC5Q96C12 935 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 MYO19Q96H55 970 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 VCPIP1Q96JH7 1222 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 SH2D3AQ9BRG2 576 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 QTRT1Q9BXR0 403 aaKnown RBP-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 SPRY4Q9C004 299 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 ASCC2Q9H1I8 757 aaPredicted RBP-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 CHRDQ9H2X0 955 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 CDCP1Q9H5V8 836 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 ZNF576Q9H609 170 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 C12orf49Q9H741 205 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 PELI2Q9HAT8 420 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 FAM13BQ9NYF5 915 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 SLC17A6Q9P2U8 582 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 PUF60Q9UHX1 559 aaKnown RBP-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 KIAA1024Q9UPX6 916 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 SIT1Q9Y3P8 196 aa-0.63□□□□□ -2.51
MIR548F3-201ENST00000408509 DSTQ03001 7570 aaKnown RBP-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 CRYABP02511 175 aaKnown RBP-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 DUX4L4P0CJ87 422 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 HOXD9P28356 352 aaPredicted RBP-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 GAS1P54826 345 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 SLC18B1Q6NT16 456 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 ZNF782Q6ZMW2 699 aaPredicted RBP-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 PDZD3Q86UT5 571 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 RELL1Q8IUW5 271 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 C11orf53Q8IXP5 236 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 GPR135Q8IZ08 494 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 NANOGP1Q8N7R0 232 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 ZNF721Q8TF20 911 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 MIEF2Q96C03 454 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 FAM193BQ96PV7 902 aaPredicted RBP-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 HDAC8Q9BY41 377 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 NELFAQ9H3P2 528 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 CCDC177Q9NQR7 707 aaPredicted RBP-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 SORCS3Q9UPU3 1222 aa-0.64□□□□□ -2.51
MIR548F3-201ENST00000408509 M0R2N6 131 aa-0.65□□□□□ -2.51
MIR548F3-201ENST00000408509 ACOT8O14734 319 aa-0.65□□□□□ -2.51
MIR548F3-201ENST00000408509 PAK4O96013 591 aaPredicted RBP-0.65□□□□□ -2.51
MIR548F3-201ENST00000408509 FGF3P11487 239 aaPredicted RBP-0.65□□□□□ -2.51
MIR548F3-201ENST00000408509 FXR1P51114 621 aaKnown RBP eCLIP-0.65□□□□□ -2.51
MIR548F3-201ENST00000408509 ETF1P62495 437 aaKnown RBP-0.65□□□□□ -2.51
MIR548F3-201ENST00000408509 NMIQ13287 307 aaPredicted RBP-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms