RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 DBF4BQ8NFT6 615 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 CRYGNQ8WXF5 182 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 TNPO1Q92973 898 aaKnown RBP15.14■□□□□ 0.01
SDF4-203ENST00000403997 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 IGLV3-22A0A075B6J6 115 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 RRN3P2A6NIE6 340 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 INSRRP14616 1297 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 PRR16Q569H4 304 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 PLEKHG4Q58EX7 1191 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 TAF2Q6P1X5 1199 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 RUFY4Q6ZNE9 571 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 PLPPR4Q7Z2D5 763 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 TMCO2Q7Z6W1 182 aaPredicted RBP15.13■□□□□ 0.01
SDF4-203ENST00000403997 RSPH3Q86UC2 560 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.13■□□□□ 0.016e-7■■■■■ 34.3
SDF4-203ENST00000403997 SEPT8Q92599 483 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
SDF4-203ENST00000403997 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
SDF4-203ENST00000403997 IPO5O00410 1097 aaKnown RBP15.12■□□□□ 0.01
SDF4-203ENST00000403997 BACH1O14867 736 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 ATG7O95352 703 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 DEXIO95424 95 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 ANAPC15P60006 121 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 SETQ01105 290 aaPredicted RBP15.12■□□□□ 0.01
SDF4-203ENST00000403997 ADGRE1Q14246 886 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 FAM26DQ5JW98 314 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 MARCH8Q5T0T0 291 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 FAM117BQ6P1L5 589 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.12■□□□□ 0.013e-10■■□□□ 11.5
SDF4-203ENST00000403997 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 OSBPL7Q9BZF2 842 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 CERS4Q9HA82 394 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 GBF1Q92538 1859 aa15.12■□□□□ 0.01
SDF4-203ENST00000403997 POTEB3A0JP26 581 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 MBLAC1A4D2B0 266 aaPredicted RBP15.11■□□□□ 0.01
SDF4-203ENST00000403997 DHX15O43143 795 aaKnown RBP15.11■□□□□ 0.01
SDF4-203ENST00000403997 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
SDF4-203ENST00000403997 CCNE2O96020 404 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 CHRNA1P02708 482 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 AMHP03971 560 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 CIITAP33076 1130 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 TAP1Q03518 808 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 PLCB4Q15147 1175 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 FAM160B1Q5W0V3 765 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 MIS18BP1Q6P0N0 1132 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 POTEBQ6S5H4 581 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 ABHD15Q6UXT9 468 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 RPAINQ86UA6 219 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 ZBTB10Q96DT7 871 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 RAD9AQ99638 391 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 TBC1D22BQ9NU19 505 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 PCDHA4Q9UN74 947 aa15.11■□□□□ 0.01
SDF4-203ENST00000403997 IGKV6D-21A0A0A0MT36 114 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 RFXAPO00287 272 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 CDKL5O76039 1030 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 ARHGEF15O94989 841 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 GJB5O95377 273 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 SLC26A2P50443 739 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 USP11P51784 963 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 SCRN1Q12765 414 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
SDF4-203ENST00000403997 SWSAP1Q6NVH7 229 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 PDXDC2PQ6P474 469 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 MYOCDQ8IZQ8 938 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 TRAPPC12Q8WVT3 735 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 ARNTL2Q8WYA1 636 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 AIFM3Q96NN9 605 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 FAM49AQ9H0Q0 323 aaPredicted RBP15.1■□□□□ 0.01
SDF4-203ENST00000403997 ZNF302Q9NR11 478 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 TCEAL9Q9UHQ7 104 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 TPCN1Q9ULQ1 816 aa15.1■□□□□ 0.01
SDF4-203ENST00000403997 EYSQ5T1H1 3165 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 LCHNA4D1U4 455 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 HBP1O60381 514 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 GHRP10912 638 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 AK2P54819 239 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 ZNF746Q6NUN9 644 aaPredicted RBP15.09■□□□□ 0.01
SDF4-203ENST00000403997 CCDC60Q8IWA6 550 aaPredicted RBP15.09■□□□□ 0.01
SDF4-203ENST00000403997 CKAP2LQ8IYA6 745 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 TBCKQ8TEA7 893 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 IFIH1Q9BYX4 1025 aaKnown RBP15.09■□□□□ 0.01
SDF4-203ENST00000403997 C22orf23Q9BZE7 217 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 PRDM6Q9NQX0 595 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 PCDHA2Q9Y5H9 948 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 CDY2AQ9Y6F7 541 aa15.09■□□□□ 0.01
SDF4-203ENST00000403997 PRUNE2Q8WUY3 3088 aa15.08■□□□□ 0
SDF4-203ENST00000403997 EDIL3O43854 480 aa15.08■□□□□ 0
SDF4-203ENST00000403997 PFKFB2O60825 505 aa15.08■□□□□ 0
SDF4-203ENST00000403997 RPLP2P05387 115 aaKnown RBP15.08■□□□□ 0
SDF4-203ENST00000403997 PSAPP07602 524 aa15.08■□□□□ 0
SDF4-203ENST00000403997 KLRC1P26715 233 aa15.08■□□□□ 0
SDF4-203ENST00000403997 MRPS6P82932 125 aaKnown RBP15.08■□□□□ 0
SDF4-203ENST00000403997 KRT76Q01546 638 aa15.08■□□□□ 0
SDF4-203ENST00000403997 MGAT3Q09327 533 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms