RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PAMP19021 973 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 MORF4L2Q15014 288 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 CEP55Q53EZ4 464 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 DDIASQ8IXT1 998 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 LRRC53A6NM62 1247 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 ALFQ53S48 1182 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
SMU1-201ENST00000397149 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 ASCC2Q9H1I8 757 aaPredicted RBP13.24□□□□□ -0.29
SMU1-201ENST00000397149 CYP4F11Q9HBI6 524 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 GTF2A1LQ9UNN4 478 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 NFKBIAP25963 317 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 FAM49AQ9H0Q0 323 aaPredicted RBP13.24□□□□□ -0.29
SMU1-201ENST00000397149 TMEM232C9JQI7 657 aa13.24□□□□□ -0.29
SMU1-201ENST00000397149 MYL3P08590 195 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 PAPOLAP51003 745 aaKnown RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 SLC16A1P53985 500 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 LRRC41Q15345 812 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 MFSD14BQ5SR56 506 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 HIBCHQ6NVY1 386 aaPredicted RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 VPS39Q96JC1 886 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 KLHL18O94889 574 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 NNMTP40261 264 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 TRAF7Q6Q0C0 670 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 KDELC2Q7Z4H8 507 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 C11orf96Q7Z7L8 435 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 PPP2R2CQ9Y2T4 447 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 MEIS1O00470 390 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 FTCDO95954 541 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 SLC7A5Q01650 507 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 MTERF2Q49AM1 385 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 SLFN12Q8IYM2 578 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 LINS1Q8NG48 757 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 EIF3CQ99613 913 aaKnown RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 GFPT2O94808 682 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 CA4P22748 312 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 EFTUD2Q15029 972 aaKnown RBP eCLIP13.23□□□□□ -0.292e-7■■□□□ 13.6
SMU1-201ENST00000397149 AOC3Q16853 763 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 ARL13BQ3SXY8 428 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 KIAA1755Q5JYT7 1200 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 ANKS3Q6ZW76 656 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 APPL2Q8NEU8 664 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 MTBPQ96DY7 904 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 TMEM245Q9H330 911 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 CAPN1P07384 714 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 PDCLQ13371 301 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 C16orf72Q14CZ0 275 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 C1orf146Q5VVC0 180 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 LRRC8EQ6NSJ5 796 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 C16orf62Q7Z3J2 963 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 SPATA5Q8NB90 893 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 NGRNQ9NPE2 291 aaKnown RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 NOVA2Q9UNW9 492 aaKnown RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 CCDC15Q0P6D6 951 aa13.23□□□□□ -0.29
SMU1-201ENST00000397149 DDX53Q86TM3 631 aaKnown RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 SYT2Q8N9I0 419 aaPredicted RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 RPAP3Q9H6T3 665 aaPredicted RBP13.23□□□□□ -0.29
SMU1-201ENST00000397149 GYG2O15488 501 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 EPB42P16452 691 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 VN1R5Q7Z5H4 357 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 MCF2L2Q86YR7 1114 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 SRRM1Q8IYB3 904 aaKnown RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 APPBP2Q92624 585 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 SH3GL2Q99962 352 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 H0YCG3 227 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 KCNA2P16389 499 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 HDAC4P56524 1084 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 CACNB2Q08289 660 aaPredicted RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 TNNI3KQ59H18 835 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 RUNDC3BQ96NL0 473 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 RNPEPQ9H4A4 650 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 FPGT-TNNI3KV9GXZ4 949 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 ZAP70P43403 619 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 AHI1Q8N157 1196 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 SDR42E1Q8WUS8 393 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 BTBD6Q96KE9 485 aa13.22□□□□□ -0.29
SMU1-201ENST00000397149 MAGEB10Q96LZ2 347 aaPredicted RBP13.22□□□□□ -0.29
SMU1-201ENST00000397149 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms