RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 MMS19Q96T76 1030 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 PDE11AQ9HCR9 933 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 TCP1P17987 556 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 CDK17Q00537 523 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 C2orf54Q08AI8 447 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 KIAA0753Q2KHM9 967 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 SCFD1Q8WVM8 642 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 HINFPQ9BQA5 517 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 EDEM3Q9BZQ6 932 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 ZMYND10O75800 440 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 ALAS1P13196 640 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 CYP2J2P51589 502 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 LRRC55Q6ZSA7 311 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 CYP2W1Q8TAV3 490 aa12.7□□□□□ -0.38
PDXDC1-202ENST00000396410 ZNF185O15231 689 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 KRT13P13646 458 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 VSNL1P62760 191 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 LEKR1Q6ZMV7 388 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 MIER3Q7Z3K6 550 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 SYT2Q8N9I0 419 aaPredicted RBP12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 PNKPQ96T60 521 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 CYP3A7-CYP3A51PA0A087WV96 503 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 EPHB6O15197 1021 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 EYA4O95677 639 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 MYBP10242 640 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 CYP3A7P24462 503 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 ODR4Q5SWX8 454 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 NACC1Q96RE7 527 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 ADAMTS1Q9UHI8 967 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 TBC1D8O95759 1140 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 NR3C1P04150 777 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 PLA2G4AP47712 749 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 CETN1Q12798 172 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 GIT2Q14161 759 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 ANKZF1Q9H8Y5 726 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 PRELPP51888 382 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 RNASE9P60153 205 aaKnown RBP12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 TTYH3Q9C0H2 523 aa12.69□□□□□ -0.38
PDXDC1-202ENST00000396410 EXOC3O60645 756 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 MYCLP12524 364 aaPredicted RBP12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 ZNF341Q9BYN7 854 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 SLC12A3P55017 1021 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 HYIQ5T013 277 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 C8orf74Q6P047 294 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 MYH8P13535 1937 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 A0A1W2PRG0 241 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 ZRANB2O95218 330 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 ASNSP08243 561 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
PDXDC1-202ENST00000396410 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 PDXKO00764 312 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 FLOT1O75955 427 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 PSMC2P35998 433 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 SLC30A10Q6XR72 485 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 VCPKMTQ9H867 229 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 ZCCHC17Q9NP64 241 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 GCNT4Q9P109 453 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 TMX2Q9Y320 296 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 USP8P40818 1118 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 USP14P54578 494 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 CASP8Q14790 479 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 FRMD5Q7Z6J6 570 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 ETNPPLQ8TBG4 499 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 RUSC1Q9BVN2 902 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 SHTN1A0MZ66 631 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 NCK2O43639 380 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 260.1 ms