RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 NR2F2P24468 414 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 ZNF280AP59817 542 aaPredicted RBP28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 PDXDC1Q6P996 788 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 POLD4Q9HCU8 107 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 PRPF6O94906 941 aaKnown RBP28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 HSD17B4P51659 736 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 CACNA2D4Q7Z3S7 1137 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 KRT26Q7Z3Y9 468 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 ZNF577Q9BSK1 485 aa28.25■■■□□ 2.11
SMARCD3-203ENST00000392811 NFKBIEO00221 500 aa28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 ZSCAN20P17040 1043 aaPredicted RBP28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 EIF4A3P38919 411 aaKnown RBP28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 VAV2P52735 878 aa28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 SPA17Q15506 151 aa28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 FAM184BQ9ULE4 1060 aa28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 MYO6Q9UM54 1294 aa28.24■■■□□ 2.11
SMARCD3-203ENST00000392811 NOL4O94818 638 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 SETQ01105 290 aaPredicted RBP28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 WHAMMP3Q1A5X7 153 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 BMT2Q1RMZ1 405 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 EHBP1Q8NDI1 1231 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 UNC45AQ9H3U1 944 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 WDR46O15213 610 aaKnown RBP28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 KIF11P52732 1056 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 TNFAIP1Q13829 316 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 GPIHBP1Q8IV16 184 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 PRPF38AQ8NAV1 312 aaKnown RBP28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 HOOK2Q96ED9 719 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 LSM14BQ9BX40 385 aaKnown RBP28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 WDR11Q9BZH6 1224 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 CEP72Q9P209 647 aa28.23■■■□□ 2.11
SMARCD3-203ENST00000392811 PDXKO00764 312 aa28.22■■■□□ 2.11
SMARCD3-203ENST00000392811 ZBTB39O15060 712 aa28.22■■■□□ 2.11
SMARCD3-203ENST00000392811 ARHGAP27Q6ZUM4 889 aa28.22■■■□□ 2.11
SMARCD3-203ENST00000392811 DUSP10Q9Y6W6 482 aa28.22■■■□□ 2.11
SMARCD3-203ENST00000392811 NFIBO00712 420 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 GAP43P17677 238 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 POLD1P28340 1107 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 C1orf186Q6ZWK4 172 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 CLEC4DQ8WXI8 215 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 LPAR1Q92633 364 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 PURBQ96QR8 312 aaKnown RBP28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 MXRA8Q9BRK3 442 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 CRACR2AQ9BSW2 395 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 KIAA1683Q9H0B3 1180 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 NLRC4Q9NPP4 1024 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 FAM53CQ9NYF3 392 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 COL20A1Q9P218 1284 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 BRCA1P38398 1863 aaKnown RBP28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 SFI1A8K8P3 1242 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 ENC1O14682 589 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 CALUO43852 315 aaPredicted RBP28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 GCNT3O95395 438 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 LCA5LO95447 670 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 KIF5AQ12840 1032 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 DGKZQ13574 1117 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 TMCO3Q6UWJ1 677 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 PARD6BQ9BYG5 372 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 DEF6Q9H4E7 631 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 OLFML3Q9NRN5 406 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 PCDHA13Q9Y5I0 950 aa28.21■■■□□ 2.11
SMARCD3-203ENST00000392811 IPO5O00410 1097 aaKnown RBP28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 B3GNT9Q6UX72 402 aa28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 TRAPPC11Q7Z392 1133 aa28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 TEKT3Q9BXF9 490 aa28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 IFIH1Q9BYX4 1025 aaKnown RBP28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 TYW1Q9NV66 732 aaKnown RBP28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 WRAP73Q9P2S5 460 aaPredicted RBP28.2■■■□□ 2.11
SMARCD3-203ENST00000392811 ASTN1O14525 1302 aa28.2■■■□□ 2.1
SMARCD3-203ENST00000392811 RPTORQ8N122 1335 aa28.2■■■□□ 2.1
SMARCD3-203ENST00000392811 FAM13AO94988 1023 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 ATP1A1P05023 1023 aaKnown RBP28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 MUTP22033 750 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 RPS12P25398 132 aaKnown RBP28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 KCNH2Q12809 1159 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 EPHA7Q15375 998 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 FRMD5Q7Z6J6 570 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 TSGA10Q9BZW7 698 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 HDAC6Q9UBN7 1215 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 ASTN2O75129 1339 aaPredicted RBP28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 AKR1B10O60218 316 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 ITGB5P18084 799 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 APBA1Q02410 837 aa28.19■■■□□ 2.1
SMARCD3-203ENST00000392811 ZRANB2O95218 330 aaKnown RBP eCLIP28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 EPS15P42566 896 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 POLR2FP61218 127 aaKnown RBP28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 KCNA1Q09470 495 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 HGSNATQ68CP4 663 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 CPXCR1Q8N123 301 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 NACC1Q96RE7 527 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 ARMCX3Q9UH62 379 aaPredicted RBP28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 MACROD2A1Z1Q3 448 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 CTNND1O60716 968 aaKnown RBP28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 NR3C1P04150 777 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 ASTE1Q2TB18 679 aaPredicted RBP28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 SAMD7Q7Z3H4 446 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 MICALL2Q8IY33 904 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 MYCT1Q8N699 235 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 IL31RAQ8NI17 732 aa28.18■■■□□ 2.1
SMARCD3-203ENST00000392811 RIT2Q99578 217 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms