RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 LOC285556D6RIA3 1793 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 DOCK5Q9H7D0 1870 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 TPM1P09493 284 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 CASP5P51878 434 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 PTPN14Q15678 1187 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 NYAP1Q6ZVC0 841 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 C1orf186Q6ZWK4 172 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 MOB2Q70IA6 237 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 CNGA4Q8IV77 575 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 CLMNQ96JQ2 1002 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 PPP1R13BQ96KQ4 1090 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 ACAD9Q9H845 621 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 TBC1D22BQ9NU19 505 aa22■■□□□ 1.11
PDLIM5-205ENST00000380180 TESPA1A2RU30 521 aaPredicted RBP21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 RNF225M0QZC1 329 aaPredicted RBP21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 IRF6O14896 467 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 KIF20AO95235 890 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 NR3C2P08235 984 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 NF2P35240 595 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 VSIG10LQ86VR7 867 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 KCTD10Q9H3F6 313 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 BCAS3Q9H6U6 928 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 CYP39A1Q9NYL5 469 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 SCN4AP35499 1836 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 ATP9AO75110 1047 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 TERF1P54274 439 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 FKBP3Q00688 224 aaKnown RBP21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 PPATQ06203 517 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 TBC1D8BQ0IIM8 1120 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 TRIM14Q14142 442 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 XRRA1Q6P2D8 792 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 NEK9Q8TD19 979 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 OTUD5Q96G74 571 aa21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 A1CFQ9NQ94 594 aaKnown RBP21.99■■□□□ 1.11
PDLIM5-205ENST00000380180 TRAF5O00463 557 aa21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 TBCAO75347 108 aaKnown RBP21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 CCND2P30279 289 aa21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 ANKRD13AQ8IZ07 590 aa21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 NSUN6Q8TEA1 469 aaKnown RBP21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 SAMM50Q9Y512 469 aa21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 COL4A3BPQ9Y5P4 624 aa21.98■■□□□ 1.11
PDLIM5-205ENST00000380180 SFI1A8K8P3 1242 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 P4HBP07237 508 aaKnown RBP21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 TTLL12Q14166 644 aaPredicted RBP21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 GADL1Q6ZQY3 521 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 EPM2AIP1Q7L775 607 aaPredicted RBP21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 ERO1BQ86YB8 467 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 CCDC51Q96ER9 411 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 A0A0G2JMZ2 1700 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 GLTPD2A6NH11 291 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 GPR162Q16538 588 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 LBX2Q6XYB7 198 aa21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 NAA15Q9BXJ9 866 aaKnown RBP21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 MRPL44Q9H9J2 332 aaKnown RBP21.97■■□□□ 1.11
PDLIM5-205ENST00000380180 PEX10O60683 326 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 MYBP10242 640 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 PRIMPOLQ96LW4 560 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 ZSWIM4Q9H7M6 989 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 A0A0G2JLL6 359 aaPredicted RBP21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 CCP110O43303 1012 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 GAP43P17677 238 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 HOXD13P35453 343 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 VWA3BQ502W6 1294 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 EAPPQ56P03 285 aaPredicted RBP21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 PRRT2Q7Z6L0 340 aaPredicted RBP21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 ABHD10Q9NUJ1 306 aa21.96■■□□□ 1.11
PDLIM5-205ENST00000380180 TTC26A0AVF1 554 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 SOWAHDA6NJG2 315 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 PRPF6O94906 941 aaKnown RBP21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 FAM13AO94988 1023 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 KRT9P35527 623 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 SYCP1Q15431 976 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 MAN2A1Q16706 1144 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 KNOP1Q1ED39 458 aaKnown RBP21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 FKBP15Q5T1M5 1219 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 MYCT1Q8N699 235 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 PROCA1Q8NCQ7 364 aaPredicted RBP21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 GPRASP2Q96D09 838 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 CEP63Q96MT8 703 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 MAF1Q9H063 256 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 NDST4Q9H3R1 872 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 OLFML3Q9NRN5 406 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 KCND2Q9NZV8 630 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 BTBD7Q9P203 1132 aa21.95■■□□□ 1.1
PDLIM5-205ENST00000380180 SPDYE5A6NIY4 337 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 MAFGO15525 162 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 ERCC3P19447 782 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 QARSP47897 775 aaKnown RBP21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 KLK7P49862 253 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 MTF1Q14872 753 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 TOGARAM2Q6ZUX3 1019 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 REXO1L1PQ8IX06 675 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 CHST13Q8NET6 341 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 INPP4AQ96PE3 977 aaPredicted RBP21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 ERGIC2Q96RQ1 377 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 PPP2R2CQ9Y2T4 447 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 ARHGEF35A5YM69 484 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 CXCL11O14625 94 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 RGS20O76081 388 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 GCNT3O95395 438 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms