RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 METTL13Q8N6R0 699 aa17.1■□□□□ 0.33
CSNK1A1-202ENST00000377843 ESR2Q92731 530 aa17.1■□□□□ 0.33
CSNK1A1-202ENST00000377843 TRIM51Q9BSJ1 452 aa17.1■□□□□ 0.33
CSNK1A1-202ENST00000377843 CCSER1Q9C0I3 900 aa17.1■□□□□ 0.33
CSNK1A1-202ENST00000377843 RNF41Q9H4P4 317 aaPredicted RBP17.1■□□□□ 0.33
CSNK1A1-202ENST00000377843 SERPING1P05155 500 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 TAF11Q15544 211 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 NKX1-2Q9UD57 310 aaPredicted RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 KRIT1O00522 736 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 SNX3O60493 162 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 PPFIA2O75334 1257 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 PDE8BO95263 885 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 OAS1P00973 400 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 PRPHP41219 470 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 USP11P51784 963 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 CCNG1P51959 295 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 TBC1D25Q3MII6 688 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 FAM83BQ5T0W9 1011 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 TRIM68Q6AZZ1 485 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 ANO7Q6IWH7 933 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 SEC14L1Q92503 715 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 ITFG2Q969R8 447 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 NAF1Q96HR8 494 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 PBKQ96KB5 322 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 ARHGEF3Q9NR81 526 aa17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 PAPOLBQ9NRJ5 636 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
CSNK1A1-202ENST00000377843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.334e-10■■■□□ 17.2
CSNK1A1-202ENST00000377843 TLDC2A0PJX2 215 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 MSH2P43246 934 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 ZC3H12AQ5D1E8 599 aaKnown RBP17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 GLIS3Q8NEA6 775 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.332e-6■□□□□ 8.7
CSNK1A1-202ENST00000377843 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 KLHL29Q96CT2 875 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 ZCWPW1Q9H0M4 648 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 ZMYND8Q9ULU4 1186 aaPredicted RBP17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 NR2E1Q9Y466 385 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.33
CSNK1A1-202ENST00000377843 NHSL1Q5SYE7 1610 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 PGRMC1O00264 195 aaKnown RBP17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 CES2O00748 559 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 NMT2O60551 498 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 RTN3O95197 1032 aaPredicted RBP17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 NEFHP12036 1026 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 EVX2Q03828 476 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 BNIP1Q12981 228 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 LRRC55Q6ZSA7 311 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 LRRC57Q8N9N7 239 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 C7orf25Q9BPX7 421 aa17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 INTS9Q9NV88 658 aaKnown RBP17.08■□□□□ 0.32
CSNK1A1-202ENST00000377843 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 POLR2FP61218 127 aaKnown RBP17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 PLS1Q14651 629 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 TXNRD1Q16881 649 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.321e-14■□□□□ 10.2
CSNK1A1-202ENST00000377843 KANSL2Q9H9L4 492 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 COPS2P61201 443 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 ASRGL1Q7L266 308 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 CABP7Q86V35 215 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 BLIDQ8IZY5 108 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
CSNK1A1-202ENST00000377843 A0A1B0GVG6 124 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 STXBP3O00186 592 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 FERP16591 822 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 POU5F1Q01860 360 aaKnown RBP17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 PSMD2Q13200 908 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 CCDC134Q9H6E4 229 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 BCORQ6W2J9 1755 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 INF2Q27J81 1249 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 MFN1Q8IWA4 741 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 SLC17A8Q8NDX2 589 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 FMO2Q99518 471 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 LSM14BQ9BX40 385 aaKnown RBP17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 CEP72Q9P209 647 aa17.06■□□□□ 0.32
CSNK1A1-202ENST00000377843 MYH1P12882 1939 aa17.05■□□□□ 0.32
CSNK1A1-202ENST00000377843 SMIM24O75264 130 aa17.05■□□□□ 0.32
CSNK1A1-202ENST00000377843 LUC7L3O95232 432 aaKnown RBP17.05■□□□□ 0.32
CSNK1A1-202ENST00000377843 PYGLP06737 847 aa17.05■□□□□ 0.32
CSNK1A1-202ENST00000377843 EIF3BP55884 814 aaKnown RBP17.05■□□□□ 0.32
CSNK1A1-202ENST00000377843 UHMK1Q8TAS1 419 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms