RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TBCAO75347 108 aaKnown RBP14.33□□□□□ -0.12
TRIM40-206ENST00000376724 ERCC3P19447 782 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 LBX2Q6XYB7 198 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 ANKRD35Q8N283 1001 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 TC2NQ8N9U0 490 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
TRIM40-206ENST00000376724 TBC1D22BQ9NU19 505 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 TCEAL9Q9UHQ7 104 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 PTPRFP10586 1907 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 PAPPA2Q9BXP8 1791 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 B4DLN1 442 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 AKR1B15C9JRZ8 316 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 PNMA8AQ86V59 439 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 NCAPG2Q86XI2 1143 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 KCTD17Q8N5Z5 321 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 SCFD1Q8WVM8 642 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 TRAF5O00463 557 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 CXCL11O14625 94 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 NKRFO15226 690 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 HOXA7P31268 230 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 CASP14P31944 242 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 CASP5P51878 434 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 NLRX1Q86UT6 975 aa14.32□□□□□ -0.12
TRIM40-206ENST00000376724 C16orf45Q96MC5 204 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 ASCC2Q9H1I8 757 aaPredicted RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 R3HCC1Q9Y3T6 440 aaKnown RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
TRIM40-206ENST00000376724 LGALS16A8MUM7 142 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 SORBS3O60504 671 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 FAM13AO94988 1023 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 P4HBP07237 508 aaKnown RBP14.31□□□□□ -0.12
TRIM40-206ENST00000376724 MUTP22033 750 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 PPIL2Q13356 520 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 XRRA1Q6P2D8 792 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 C1orf186Q6ZWK4 172 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 CCDC112Q8NEF3 446 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 BAG1Q99933 345 aaPredicted RBP14.31□□□□□ -0.12
TRIM40-206ENST00000376724 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 MRPL44Q9H9J2 332 aaKnown RBP14.31□□□□□ -0.12
TRIM40-206ENST00000376724 COL4A3BPQ9Y5P4 624 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 ARHGEF35A5YM69 484 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 KIF20AO95235 890 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 FGFR1OPO95684 399 aaKnown RBP14.31□□□□□ -0.12
TRIM40-206ENST00000376724 GYPCP04921 128 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 MYBP10242 640 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 HERVK_113P62684 666 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 MAEAQ7L5Y9 396 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 MYCT1Q8N699 235 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 NEK9Q8TD19 979 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 AGTPBP1Q9UPW5 1226 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 KCNH4Q9UQ05 1017 aa14.31□□□□□ -0.12
TRIM40-206ENST00000376724 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM40-206ENST00000376724 RGS20O76081 388 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 PRPF6O94906 941 aaKnown RBP14.3□□□□□ -0.12
TRIM40-206ENST00000376724 GCNT3O95395 438 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 CCNE2O96020 404 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 TPM1P09493 284 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 QARSP47897 775 aaKnown RBP14.3□□□□□ -0.12
TRIM40-206ENST00000376724 FXR1P51114 621 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRIM40-206ENST00000376724 SP4Q02446 784 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 E4F1Q66K89 784 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-206ENST00000376724 LRRC55Q6ZSA7 311 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 RIOX2Q8IUF8 465 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 CCAR2Q8N163 923 aaKnown RBP14.3□□□□□ -0.12
TRIM40-206ENST00000376724 GPRASP2Q96D09 838 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 INPP4AQ96PE3 977 aaPredicted RBP14.3□□□□□ -0.12
TRIM40-206ENST00000376724 SH2D3AQ9BRG2 576 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 ITIH6Q6UXX5 1313 aa14.3□□□□□ -0.12
TRIM40-206ENST00000376724 DNM2P50570 870 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 FKBP3Q00688 224 aaKnown RBP14.29□□□□□ -0.12
TRIM40-206ENST00000376724 UGCGQ16739 394 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 ZCWPW2Q504Y3 356 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 TMEM139Q8IV31 216 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 ZNF507Q8TCN5 953 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 PCMTD1Q96MG8 357 aaPredicted RBP14.29□□□□□ -0.12
TRIM40-206ENST00000376724 KCTD10Q9H3F6 313 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 SCN4AP35499 1836 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 TMEM150BA6NC51 233 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 WDR64B1ANS9 1081 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 MFAP3LO75121 409 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 GJA5P36382 358 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 KRT76Q01546 638 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 FSTL1Q12841 308 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 MIIPQ5JXC2 388 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
TRIM40-206ENST00000376724 MOV10L1Q9BXT6 1211 aaKnown RBP14.29□□□□□ -0.12
TRIM40-206ENST00000376724 R3HDMLQ9H3Y0 253 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 FBXO40Q9UH90 709 aa14.29□□□□□ -0.12
TRIM40-206ENST00000376724 LOC285556D6RIA3 1793 aa14.28□□□□□ -0.12
TRIM40-206ENST00000376724 RNF225M0QZC1 329 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms