RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SLC5A5Q92911 643 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 HSD17B14Q9BPX1 270 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 LACRTQ9GZZ8 138 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 TUFT1Q9NNX1 390 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 CCPG1Q9ULG6 757 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 MYO6Q9UM54 1294 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 RSPH10B2B2RC85 870 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 RSPH10BP0C881 870 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 KCNMA1Q12791 1236 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 KIF5AQ12840 1032 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 BAP1Q92560 729 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 ZFP91Q96JP5 570 aaPredicted RBP22.31■■□□□ 1.16
VSX1-202ENST00000376709 ZNF577Q9BSK1 485 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 EDEM3Q9BZQ6 932 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 FAM184BQ9ULE4 1060 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 RCCD1A6NED2 376 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 KIF11P52732 1056 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 VAV2P52735 878 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 SETQ01105 290 aaPredicted RBP22.3■■□□□ 1.16
VSX1-202ENST00000376709 TNFAIP1Q13829 316 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 ZC3H3Q8IXZ2 948 aaKnown RBP22.3■■□□□ 1.16
VSX1-202ENST00000376709 DYDC2Q96IM9 177 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 TSGA10Q9BZW7 698 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 LTBP3Q9NS15 1303 aa22.3■■□□□ 1.16
VSX1-202ENST00000376709 ENC1O14682 589 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 AKR1B10O60218 316 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 SLITRK3O94933 977 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 MYBP10242 640 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 EIF4A3P38919 411 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 EPM2AIP1Q7L775 607 aaPredicted RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 KRT26Q7Z3Y9 468 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 AGBL1Q96MI9 1066 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 IFIH1Q9BYX4 1025 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 CNOT7Q9UIV1 285 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 TRAF3IP3Q9Y228 551 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 PRPF6O94906 941 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 GCNT3O95395 438 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 TFRCP02786 760 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 ICAM1P05362 532 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 ZSCAN20P17040 1043 aaPredicted RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 INPP5BP32019 993 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 PTGER2P43116 358 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 AMPD2Q01433 879 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 BMS1Q14692 1282 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 RINT1Q6NUQ1 792 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 PDXDC1Q6P996 788 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 GPIHBP1Q8IV16 184 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 KRT222Q8N1A0 295 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 LSM14BQ9BX40 385 aaKnown RBP22.29■■□□□ 1.16
VSX1-202ENST00000376709 PARD6BQ9BYG5 372 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 NLRC4Q9NPP4 1024 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 CEP72Q9P209 647 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 HACL1Q9UJ83 578 aa22.29■■□□□ 1.16
VSX1-202ENST00000376709 MACROD2A1Z1Q3 448 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 FZD9O00144 591 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 ZNF263O14978 683 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 CALUO43852 315 aaPredicted RBP22.28■■□□□ 1.16
VSX1-202ENST00000376709 ARHGAP27Q6ZUM4 889 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 CRACR2AQ9BSW2 395 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 WDR11Q9BZH6 1224 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 POLD4Q9HCU8 107 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 FAM53CQ9NYF3 392 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 CTAGE15A4D2H0 777 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 PDXKO00764 312 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 USO1O60763 962 aaKnown RBP22.28■■□□□ 1.16
VSX1-202ENST00000376709 CTAGE8P0CG41 777 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 TUBB4BP68371 445 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 CTAGE6Q86UF2 777 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 CTAGE4Q8IX94 777 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 PRPF38AQ8NAV1 312 aaKnown RBP22.28■■□□□ 1.16
VSX1-202ENST00000376709 DUSP10Q9Y6W6 482 aa22.28■■□□□ 1.16
VSX1-202ENST00000376709 ZNF541Q9H0D2 1346 aa22.27■■□□□ 1.16
VSX1-202ENST00000376709 FAM13AO94988 1023 aa22.27■■□□□ 1.16
VSX1-202ENST00000376709 ARP10275 920 aa22.27■■□□□ 1.16
VSX1-202ENST00000376709 GAP43P17677 238 aa22.27■■□□□ 1.16
VSX1-202ENST00000376709 SECISBP2LQ93073 1101 aaKnown RBP22.27■■□□□ 1.16
VSX1-202ENST00000376709 HOOK2Q96ED9 719 aa22.27■■□□□ 1.16
VSX1-202ENST00000376709 NUCKS1Q9H1E3 243 aaKnown RBP22.27■■□□□ 1.16
VSX1-202ENST00000376709 ARMCX3Q9UH62 379 aaPredicted RBP22.27■■□□□ 1.16
VSX1-202ENST00000376709 PCDHA13Q9Y5I0 950 aa22.27■■□□□ 1.16
VSX1-202ENST00000376709 RBBP6Q7Z6E9 1792 aaKnown RBP22.27■■□□□ 1.16
VSX1-202ENST00000376709 ATP1A1P05023 1023 aaKnown RBP22.26■■□□□ 1.15
VSX1-202ENST00000376709 HOXD13P35453 343 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 KCNH2Q12809 1159 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 TRAPPC11Q7Z392 1133 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 LPAR1Q92633 364 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 OLFML3Q9NRN5 406 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 TYW1Q9NV66 732 aaKnown RBP22.26■■□□□ 1.15
VSX1-202ENST00000376709 HDAC6Q9UBN7 1215 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 FHOD1Q9Y613 1164 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 SFI1A8K8P3 1242 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 IPO5O00410 1097 aaKnown RBP22.26■■□□□ 1.15
VSX1-202ENST00000376709 WDR46O15213 610 aaKnown RBP22.26■■□□□ 1.15
VSX1-202ENST00000376709 HSD17B4P51659 736 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 POLR2FP61218 127 aaKnown RBP22.26■■□□□ 1.15
VSX1-202ENST00000376709 DGKZQ13574 1117 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 TDRD12Q587J7 1177 aaKnown RBP22.26■■□□□ 1.15
VSX1-202ENST00000376709 TEKT3Q9BXF9 490 aa22.26■■□□□ 1.15
VSX1-202ENST00000376709 DEFB129Q9H1M3 183 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms