RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TTI1O43156 1089 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 EDIL3O43854 480 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 XRCC4Q13426 336 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 BANK1Q8NDB2 785 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 MIEF2Q96C03 454 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 CALR3Q96L12 384 aaKnown RBP18.05■□□□□ 0.48
TRIM39-201ENST00000376656 PIGSQ96S52 555 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 LAMB2P55268 1798 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 DHX9Q08211 1270 aaKnown RBP18.05■□□□□ 0.48
TRIM39-201ENST00000376656 SF3A3Q12874 501 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRIM39-201ENST00000376656 TMEM266Q2M3C6 531 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 CCDC50Q8IVM0 306 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 ZNF444Q8N0Y2 327 aaPredicted RBP18.05■□□□□ 0.48
TRIM39-201ENST00000376656 BTNL10A8MVZ5 291 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 F8VZ95 297 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 LZTS2Q9BRK4 669 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 PANK4Q9NVE7 773 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 TMEM119Q4V9L6 283 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 KRT79Q5XKE5 535 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 IRF2BP2Q7Z5L9 587 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 SH3RF3Q8TEJ3 882 aaPredicted RBP18.04■□□□□ 0.48
TRIM39-201ENST00000376656 PSMD1Q99460 953 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 FOXR2Q6PJQ5 311 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 GJA10Q969M2 543 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 CEP63Q96MT8 703 aa18.04■□□□□ 0.48
TRIM39-201ENST00000376656 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 TPCN2Q8NHX9 752 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 MAGEC3Q8TD91 643 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 A0A0G2JS52 829 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 ECM2O94769 699 aaPredicted RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 EZRP15311 586 aaKnown RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 ARMC9Q7Z3E5 817 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 DZIP1Q86YF9 867 aaKnown RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 TRIM31Q9BZY9 425 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 UBA5Q9GZZ9 404 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 SEC63Q9UGP8 760 aaKnown RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 MGRN1O60291 552 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 SLC9A1P19634 815 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 EPS15P42566 896 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 XPO6Q96QU8 1125 aaKnown RBP18.03■□□□□ 0.48
TRIM39-201ENST00000376656 KDM4CQ9H3R0 1056 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 NAGPAQ9UK23 515 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 PNMA2Q9UL42 364 aa18.03■□□□□ 0.48
TRIM39-201ENST00000376656 DNAJC8O75937 253 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 GCFC2P16383 781 aaKnown RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 RASA1P20936 1047 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 MRPL12P52815 198 aaKnown RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 KCNH2Q12809 1159 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 CHMP6Q96FZ7 201 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 ATP8A1Q9Y2Q0 1164 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 CCDC188H7C350 402 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 CAND2O75155 1236 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 ELF3P78545 371 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 IFFO1Q0D2I5 559 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 ORC2Q13416 577 aaPredicted RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 ERMARDQ5T6L9 678 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 ALKBH5Q6P6C2 394 aaKnown RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 PEX26Q7Z412 305 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 TLCD1Q96CP7 247 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 LRRC27Q9C0I9 530 aa18.02■□□□□ 0.48
TRIM39-201ENST00000376656 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
TRIM39-201ENST00000376656 NPHP3-ACAD11A0A0J9YXS1 232 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 CTNND1O60716 968 aaKnown RBP18.01■□□□□ 0.47
TRIM39-201ENST00000376656 MARSP56192 900 aaKnown RBP18.01■□□□□ 0.47
TRIM39-201ENST00000376656 RAB34Q9BZG1 259 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 FRMD3A2A2Y4 597 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 GNA14O95837 355 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 GHRP10912 638 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 PDIA5Q14554 519 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 IFI16Q16666 785 aaKnown RBP18.01■□□□□ 0.47
TRIM39-201ENST00000376656 C10orf76Q5T2E6 689 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 MSL1Q68DK7 614 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 TLDC1Q6P9B6 456 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 KIRREL3Q8IZU9 778 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 COA7Q96BR5 231 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 SLITRK6Q9H5Y7 841 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 TRIM37O94972 964 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 HIBCHQ6NVY1 386 aaPredicted RBP18.01■□□□□ 0.47
TRIM39-201ENST00000376656 DPY19L2P1Q6NXN4 242 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 TXNRD3Q86VQ6 643 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 RASGEF1CQ8N431 466 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 FAM129AQ9BZQ8 928 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 NR2E1Q9Y466 385 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 ROBO3Q96MS0 1386 aa18.01■□□□□ 0.47
TRIM39-201ENST00000376656 CCT8L1PA6NM43 557 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 ATP6V1G2O95670 118 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 RPSAP08865 295 aaKnown RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 ADAM9Q13443 819 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
TRIM39-201ENST00000376656 CCDC26Q8TAB7 109 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 TGFBRAP1Q8WUH2 860 aa18■□□□□ 0.47
TRIM39-201ENST00000376656 SEC14L1Q92503 715 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms