RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.27
VPS13A-204ENST00000376634 POTEB3A0JP26 581 aa13.4□□□□□ -0.27
VPS13A-204ENST00000376634 CREB3O43889 395 aa13.4□□□□□ -0.27
VPS13A-204ENST00000376634 DR1Q01658 176 aa13.4□□□□□ -0.27
VPS13A-204ENST00000376634 POTEBQ6S5H4 581 aa13.4□□□□□ -0.27
VPS13A-204ENST00000376634 G2E3Q7L622 706 aa13.4□□□□□ -0.27
VPS13A-204ENST00000376634 COPG1Q9Y678 874 aaKnown RBP13.4□□□□□ -0.27
VPS13A-204ENST00000376634 ARMCX2Q7L311 632 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 RASGRF2O14827 1237 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ZBTB7BO15156 539 aaPredicted RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ESRRBO95718 433 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 PDIK1LQ8N165 341 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 PFKFB2O60825 505 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ZNF18P17022 549 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 BTDP43251 543 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 TRAPPC10P48553 1259 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ZNF827Q17R98 1081 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 CASP14P31944 242 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 KIAA0825Q8IV33 1275 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 IFNL3Q8IZI9 196 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ASPSCR1Q9BZE9 553 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 UBE2TQ9NPD8 197 aaPredicted RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 MRPL40Q9NQ50 206 aaKnown RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 PSMA2P25787 234 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ACSL3O95573 720 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 USP14P54578 494 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 NSUN2Q08J23 767 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
VPS13A-204ENST00000376634 ENOX1Q8TC92 643 aaKnown RBP13.39□□□□□ -0.27
VPS13A-204ENST00000376634 RECQLP46063 649 aaPredicted RBP13.38□□□□□ -0.27
VPS13A-204ENST00000376634 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 WDR91A4D1P6 747 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 MYL1P05976 194 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 ADCY2Q08462 1091 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 DMTNQ08495 405 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 IMPG1Q17R60 797 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 CCDC92Q53HC0 331 aaPredicted RBP13.38□□□□□ -0.27
VPS13A-204ENST00000376634 ACAD11Q709F0 780 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 TJP3O95049 919 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 CXCR5P32302 372 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 HSPH1Q92598 858 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 GFPT2O94808 682 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 SLCO1A2P46721 670 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 MRPL28Q13084 256 aaKnown RBP13.38□□□□□ -0.27
VPS13A-204ENST00000376634 FLAD1Q8NFF5 587 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
VPS13A-204ENST00000376634 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 KRT4P19013 534 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 ETF1P62495 437 aaKnown RBP13.38□□□□□ -0.27
VPS13A-204ENST00000376634 ALCAMQ13740 583 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 FSCBQ5H9T9 825 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 HSPA4LO95757 839 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 KRT8P05787 483 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 NAF1Q96HR8 494 aaKnown RBP13.38□□□□□ -0.27
VPS13A-204ENST00000376634 SATB2Q9UPW6 733 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 SERPINB2P05120 415 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 SURF1Q15526 300 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 KIAA1755Q5JYT7 1200 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 PCDHA4Q9UN74 947 aa13.38□□□□□ -0.27
VPS13A-204ENST00000376634 PYGBP11216 843 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 GFAPP14136 432 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
VPS13A-204ENST00000376634 STX18Q9P2W9 335 aaKnown RBP13.37□□□□□ -0.27
VPS13A-204ENST00000376634 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 ENC1O14682 589 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
VPS13A-204ENST00000376634 CA4P22748 312 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 KCNA1Q09470 495 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 MOCS3O95396 460 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 MXD4Q14582 209 aaPredicted RBP13.37□□□□□ -0.27
VPS13A-204ENST00000376634 RPF1Q9H9Y2 349 aaKnown RBP13.37□□□□□ -0.27
VPS13A-204ENST00000376634 ERVV-2B6SEH9 535 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 SKOR1P84550 965 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 MECOMQ03112 1051 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 A0A0D9SFI3 127 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 GOLGA8HP0CJ92 632 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 ELF1P32519 619 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
VPS13A-204ENST00000376634 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms