RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 IQCKQ8N0W5 287 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 TBC1D7Q9P0N9 293 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
ABCF1-202ENST00000376545 GOLGA6CA6NDK9 693 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 OPA1O60313 960 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 GLI1P08151 1106 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 GOLGA6DP0CG33 693 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 ANXA13P27216 316 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 CASP5P51878 434 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 CD302Q8IX05 232 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 NELFCDQ8IXH7 590 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 KCTD17Q8N5Z5 321 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 EIF1ADQ8N9N8 165 aaKnown RBP11.73□□□□□ -0.53
ABCF1-202ENST00000376545 C1orf131Q8NDD1 294 aaKnown RBP11.73□□□□□ -0.53
ABCF1-202ENST00000376545 GOLGA6AQ9NYA3 693 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 BZW2Q9Y6E2 419 aaKnown RBP11.73□□□□□ -0.53
ABCF1-202ENST00000376545 PDXKO00764 312 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 CETN3O15182 167 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 CIITAP33076 1130 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 IFT20Q8IY31 132 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 PCDHA1Q9Y5I3 950 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
ABCF1-202ENST00000376545 IRAK1P51617 712 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 KLHL30Q0D2K2 578 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
ABCF1-202ENST00000376545 KNOP1Q1ED39 458 aaKnown RBP11.72□□□□□ -0.53
ABCF1-202ENST00000376545 TATDN1Q6P1N9 297 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 PSMB7Q99436 277 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 MXD3Q9BW11 206 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 MARCH6O60337 910 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 SREBF1P36956 1147 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 STAT3P40763 770 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 JAM2P57087 298 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 PSMC6P62333 389 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 NFIAQ12857 509 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 ASIC2Q16515 512 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 TTMPQ5BVD1 217 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 FAM133AQ8N9E0 248 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 LRRC57Q8N9N7 239 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
ABCF1-202ENST00000376545 PIK3R5Q8WYR1 880 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 FAM20AQ96MK3 541 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
ABCF1-202ENST00000376545 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 EEF2P13639 858 aaKnown RBP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 NR2F2P24468 414 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 PON1P27169 355 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 CORO7P57737 925 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 EPHA7Q15375 998 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 NFIL3Q16649 462 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 USP38Q8NB14 1042 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 TEKT1Q969V4 418 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 BORCS6Q96GS4 357 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 HINFPQ9BQA5 517 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 RASSF4Q9H2L5 321 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 KANSL2Q9H9L4 492 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 SIX2Q9NPC8 291 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 A6NNZ2 444 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 TRIM66O15016 1216 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 SLC16A3O15427 465 aaKnown RBP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 UCHL3P15374 230 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 MATR3P43243 847 aaKnown RBP eCLIP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 CARSP49589 748 aaKnown RBP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 PTK2Q05397 1052 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 TUBB8Q3ZCM7 444 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 GPIHBP1Q8IV16 184 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 SCFD2Q8WU76 684 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.53
ABCF1-202ENST00000376545 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 REEP2Q9BRK0 252 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 IDI2Q9BXS1 227 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 VAV3Q9UKW4 847 aa11.71□□□□□ -0.53
ABCF1-202ENST00000376545 GTPBP10A4D1E9 387 aaKnown RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 F8W031 263 aaPredicted RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 SSBP05455 408 aaKnown RBP eCLIP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 CYP3A4P08684 503 aa11.71□□□□□ -0.54
ABCF1-202ENST00000376545 FKBP1AP62942 108 aaKnown RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms