RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CYP4A11Q02928 519 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CCDC40Q4G0X9 1142 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CCDC170Q8IYT3 715 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 AGBL3Q8NEM8 1001 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
MSH5-202ENST00000375740 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 KCTD10Q9H3F6 313 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 GCOM1H8Y6P7 765 aaPredicted RBP15.41■□□□□ 0.06
MSH5-202ENST00000375740 POLR2MP0CAP2 368 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CDK17Q00537 523 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CXCL9Q07325 125 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 SLC30A10Q6XR72 485 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 MTMR14Q8NCE2 650 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 FAM204AQ9H8W3 233 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 STK24Q9Y6E0 443 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 TUBB2AQ13885 445 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 NBPF9Q3BBW0 867 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 FAM83AQ86UY5 434 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 CEP63Q96MT8 703 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 EIF2AK1Q9BQI3 630 aaKnown RBP15.4■□□□□ 0.06
MSH5-202ENST00000375740 WDR18Q9BV38 432 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 TUBB2BQ9BVA1 445 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 FBXO28Q9NVF7 368 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 PGAP2Q9UHJ9 254 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 PLAGL2Q9UPG8 496 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 SCAF8Q9UPN6 1271 aaKnown RBP15.4■□□□□ 0.06
MSH5-202ENST00000375740 RCCD1A6NED2 376 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 PLEKP08567 350 aaPredicted RBP15.4■□□□□ 0.06
MSH5-202ENST00000375740 HNRNPH3P31942 346 aaKnown RBP15.4■□□□□ 0.06
MSH5-202ENST00000375740 PSEN1P49768 467 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 UBXN2AP68543 259 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 CYP27A1Q02318 531 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 MSANTD4Q8NCY6 345 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 CASP5P51878 434 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 CEP112Q8N8E3 955 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 SMCR8Q8TEV9 937 aaPredicted RBP15.4■□□□□ 0.06
MSH5-202ENST00000375740 JAKMIP2Q96AA8 810 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 CCDC42Q96M95 316 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 POLR3CQ9BUI4 534 aaPredicted RBP15.4■□□□□ 0.06
MSH5-202ENST00000375740 LACRTQ9GZZ8 138 aa15.4■□□□□ 0.06
MSH5-202ENST00000375740 SHTN1A0MZ66 631 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 WNT10BO00744 389 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 ADAM9Q13443 819 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 ZNF662Q6ZS27 426 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 OTOP1Q7RTM1 612 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 FAM160B2Q86V87 743 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
MSH5-202ENST00000375740 BHMT2Q9H2M3 363 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 POLD4Q9HCU8 107 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 MRPL11Q9Y3B7 192 aaKnown RBP15.39■□□□□ 0.05
MSH5-202ENST00000375740 PLA2G6O60733 806 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 IPO7O95373 1038 aaKnown RBP15.39■□□□□ 0.05
MSH5-202ENST00000375740 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
MSH5-202ENST00000375740 SFR1Q86XK3 245 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 NOA1Q8NC60 698 aaKnown RBP15.39■□□□□ 0.05
MSH5-202ENST00000375740 RIN2Q8WYP3 895 aaPredicted RBP15.39■□□□□ 0.05
MSH5-202ENST00000375740 KAT2BQ92831 832 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 ARHGAP20Q9P2F6 1191 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 FEM1BQ9UK73 627 aa15.39■□□□□ 0.05
MSH5-202ENST00000375740 LRRC53A6NM62 1247 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 ZNF263O14978 683 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 GNA14O95837 355 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 CTTNQ14247 550 aaKnown RBP15.38■□□□□ 0.05
MSH5-202ENST00000375740 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 MICALL1Q8N3F8 863 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 BAP1Q92560 729 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 DEF6Q9H4E7 631 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 RSPH10B2B2RC85 870 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 KRT86O43790 486 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 EIF3JO75822 258 aaKnown RBP15.38■□□□□ 0.05
MSH5-202ENST00000375740 EYA4O95677 639 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 RSPH10BP0C881 870 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 BAG6P46379 1132 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 MAP3K10Q02779 954 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 EP400NLQ6ZTU2 488 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 KRT26Q7Z3Y9 468 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 TRIM59Q8IWR1 403 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 HSD17B14Q9BPX1 270 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 RUSC1Q9BVN2 902 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 BCAS3Q9H6U6 928 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 MYO6Q9UM54 1294 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 RABGAP1Q9Y3P9 1069 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
MSH5-202ENST00000375740 PSMD10O75832 226 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 SLITRK3O94933 977 aa15.37■□□□□ 0.05
MSH5-202ENST00000375740 EIF4A3P38919 411 aaKnown RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 MARSP56192 900 aaKnown RBP15.37■□□□□ 0.05
MSH5-202ENST00000375740 AMPD2Q01433 879 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms