RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 PRR16Q569H4 304 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 IRF2BP2Q7Z5L9 587 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 FRMD5Q7Z6J6 570 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 MBOAT7Q96N66 472 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 ZIM3Q96PE6 472 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 SPAG5Q96R06 1193 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 TAF1LQ8IZX4 1826 aa15.97■□□□□ 0.15
MSH5-201ENST00000375703 ESYT3A0FGR9 886 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 MEIS2O14770 477 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 EEF2P13639 858 aaKnown RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 PTK2Q05397 1052 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 NFIAQ12857 509 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 PAK2Q13177 524 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 PABPC4Q13310 644 aaKnown RBP eCLIP15.96■□□□□ 0.15
MSH5-201ENST00000375703 CDC37Q16543 378 aaPredicted RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 C10orf76Q5T2E6 689 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 ERMNQ8TAM6 284 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 TAF4BQ92750 862 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 TRAF3IP3Q9Y228 551 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 MYH7BA7E2Y1 1941 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 ZSCAN5CA6NGD5 496 aaPredicted RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 ANKRD65E5RJM6 399 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 TOM1O60784 492 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 AFPP02771 609 aaKnown RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 FAM153BP0C7A2 387 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 ARHGAP4P98171 946 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 FAM153CQ494X1 144 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 TTMPQ5BVD1 217 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 APOBEC3HQ6NTF7 200 aaKnown RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 HHIPL2Q6UWX4 724 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 SYT2Q8N9I0 419 aaPredicted RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 TEKT1Q969V4 418 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 FAM153AQ9UHL3 310 aa15.96■□□□□ 0.15
MSH5-201ENST00000375703 BZW2Q9Y6E2 419 aaKnown RBP15.96■□□□□ 0.15
MSH5-201ENST00000375703 UCHL3P15374 230 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 MAGEA9P43362 315 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 CORO7P57737 925 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 GNGT1P63211 74 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 EXOC3L4Q17RC7 722 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 CFAP58Q5T655 872 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 MOXD1Q6UVY6 613 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 ZNF571Q7Z3V5 609 aaPredicted RBP15.96■□□□□ 0.14
MSH5-201ENST00000375703 ETNPPLQ8TBG4 499 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 MKL1Q969V6 931 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.14
MSH5-201ENST00000375703 INPP4AQ96PE3 977 aaPredicted RBP15.96■□□□□ 0.14
MSH5-201ENST00000375703 PLCB1Q9NQ66 1216 aa15.96■□□□□ 0.14
MSH5-201ENST00000375703 FOCADQ5VW36 1801 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 RPA1P27694 616 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 NOP2P46087 812 aaKnown RBP15.95■□□□□ 0.14
MSH5-201ENST00000375703 DDR1Q08345 913 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 SPIRE1Q08AE8 756 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 AP3B2Q13367 1082 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 RPS6KA1Q15418 735 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 SFR1Q86XK3 245 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 IQCKQ8N0W5 287 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 DCAF4Q8WV16 495 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 C10orf71Q711Q0 1435 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
MSH5-201ENST00000375703 BTNL10A8MVZ5 291 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 G3V3G9 751 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 KCNK3O14649 394 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 CALUO43852 315 aaPredicted RBP15.95■□□□□ 0.14
MSH5-201ENST00000375703 SPATA31C1P0DKV0 1188 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 XRCC5P13010 732 aaKnown RBP15.95■□□□□ 0.14
MSH5-201ENST00000375703 PON1P27169 355 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 DPY19L2P1Q6NXN4 242 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 USP38Q8NB14 1042 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 BCAS4Q8TDM0 211 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 EHD4Q9H223 541 aa15.95■□□□□ 0.14
MSH5-201ENST00000375703 FAM196BA6NMK8 535 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 PDXKO00764 312 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 KRT14P02533 472 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 HOXD13P35453 343 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 CCT5P48643 541 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 GUCY2FP51841 1108 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 SNAP25P60880 206 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 TNNC1P63316 161 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 CERKLQ49MI3 558 aaPredicted RBP15.94■□□□□ 0.14
MSH5-201ENST00000375703 TTC19Q6DKK2 380 aaPredicted RBP15.94■□□□□ 0.14
MSH5-201ENST00000375703 CASKIN2Q8WXE0 1202 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 P2RX7Q99572 595 aaKnown RBP15.94■□□□□ 0.14
MSH5-201ENST00000375703 DNAJC18Q9H819 358 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 NYAP2Q9P242 653 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 POLRMTO00411 1230 aaKnown RBP15.94■□□□□ 0.14
MSH5-201ENST00000375703 TBX3O15119 743 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 EIF3HO15372 352 aaKnown RBP eCLIP15.94■□□□□ 0.14
MSH5-201ENST00000375703 MYBP10242 640 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 TCP10Q12799 353 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 IFI16Q16666 785 aaKnown RBP15.94■□□□□ 0.14
MSH5-201ENST00000375703 SHROOM1Q2M3G4 852 aaPredicted RBP15.94■□□□□ 0.14
MSH5-201ENST00000375703 Q4G0T1 1027 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 TCERG1LQ5VWI1 586 aa15.94■□□□□ 0.14
MSH5-201ENST00000375703 EPM2AIP1Q7L775 607 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms