RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 OR2W6PQ8NHA6 318 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CFAP36Q96G28 342 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 ECEL1O95672 775 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 HP1BP3Q5SSJ5 553 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 SRLQ86TD4 932 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 RBM12Q9NTZ6 932 aaKnown RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 KIF1AQ12756 1690 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 ADGRF4Q8IZF3 695 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CCDC110Q8TBZ0 833 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 FMO2Q99518 471 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 DDX47Q9H0S4 455 aaKnown RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 SH2D4AQ9H788 454 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 C1orf112Q9NSG2 853 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 GGT7Q9UJ14 662 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 GAS8O95995 478 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 MAPK4P31152 587 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 LIG4P49917 911 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 FKBP3Q00688 224 aaKnown RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 PSMD2Q13200 908 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CCDC38Q502W7 563 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 AEBP2Q6ZN18 517 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CLEC10AQ8IUN9 316 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 FERMT1Q9BQL6 677 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 TPX2Q9ULW0 747 aaKnown RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CNTNAP5Q8WYK1 1306 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 GCKP35557 465 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 HAUS2Q9NVX0 235 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 ZNF446Q9NWS9 450 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 ANAPC5Q9UJX4 755 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CCPG1Q9ULG6 757 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 COMMD10Q9Y6G5 202 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 TARSL2A2RTX5 802 aaKnown RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 FGFR4P22455 802 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CUL1Q13616 776 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 KCNV2Q8TDN2 545 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 POMGNT1Q8WZA1 660 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 ANO3Q9BYT9 981 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 USP21Q9UK80 565 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 NR3C1P04150 777 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 CD19P15391 556 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 PDE6BP35913 854 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 KRT81Q14533 505 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 EMBQ6PCB8 327 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 ADGRA1Q86SQ6 560 aa7.1□□□□□ -1.27
SMC1A-202ENST00000375340 SEPT9Q9UHD8 586 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-202ENST00000375340 PNPLA7Q6ZV29 1317 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 SLC8A1P32418 973 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PSMC4P43686 418 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 ZNF746Q6NUN9 644 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 VPS52Q8N1B4 723 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 MICAL1Q8TDZ2 1067 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 SNX24Q9Y343 169 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 DUSP10Q9Y6W6 482 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 ITIH6Q6UXX5 1313 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 GPSM2P81274 684 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 CEP128Q6ZU80 1094 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 MSANTD4Q8NCY6 345 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 RILPQ96NA2 401 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 ELAC2Q9BQ52 826 aaKnown RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 ANKZF1Q9H8Y5 726 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 METTL14Q9HCE5 456 aaKnown RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PICK1Q9NRD5 415 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 C1orf167Q5SNV9 1468 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 TXNDC9O14530 226 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 H2AFXP16104 143 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 MFAP3P55082 362 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 HERVK_113P62684 666 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 TBC1D1Q86TI0 1168 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 TRIM51Q9BSJ1 452 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PLA2G12BQ9BX93 195 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 TXNDC16Q9P2K2 825 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 BAG2O95816 211 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 ARL1P40616 181 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 KCNH2Q12809 1159 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 SEPT14Q6ZU15 432 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PPFIBP2Q8ND30 876 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 COG1Q8WTW3 980 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 GOLPH3Q9H4A6 298 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 FAM83BQ5T0W9 1011 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PASD1Q8IV76 773 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 CTAGE3PQ8IX95 158 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 FBXL5Q9UKA1 691 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 DNAJC12Q9UKB3 198 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 SASH3O75995 380 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 KRT1P04264 644 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 HVCN1Q96D96 273 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 ATP6V1G3Q96LB4 118 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PRMT1Q99873 361 aaKnown RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 HOMER3Q9NSC5 361 aa7.09□□□□□ -1.27
SMC1A-202ENST00000375340 PDS5AQ29RF7 1337 aaKnown RBP7.09□□□□□ -1.27
SMC1A-202ENST00000375340 LRRIQ3A6PVS8 624 aaPredicted RBP7.09□□□□□ -1.28
SMC1A-202ENST00000375340 NCAPHQ15003 741 aa7.09□□□□□ -1.28
SMC1A-202ENST00000375340 C10orf76Q5T2E6 689 aa7.09□□□□□ -1.28
SMC1A-202ENST00000375340 MMS22LQ6ZRQ5 1243 aa7.09□□□□□ -1.28
SMC1A-202ENST00000375340 RFX6Q8HWS3 928 aa7.09□□□□□ -1.28
SMC1A-202ENST00000375340 CACNA1FO60840 1977 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 PPIP5K2O43314 1243 aa7.08□□□□□ -1.28
SMC1A-202ENST00000375340 ZBED4O75132 1171 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms