RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 MARSP56192 900 aaKnown RBP9.05□□□□□ -0.96
UBR4-202ENST00000375224 LRRC41Q15345 812 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 CEP55Q53EZ4 464 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 WDR24Q96S15 920 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 SLF1Q9BQI6 1058 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 ATAD5Q96QE3 1844 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 CTAGE9A4FU28 777 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 CETN3O15182 167 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 TBCAO75347 108 aaKnown RBP9.05□□□□□ -0.96
UBR4-202ENST00000375224 MNAT1P51948 309 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 PPP2R3AQ06190 1150 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 GIT2Q14161 759 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 ZYXQ15942 572 aaKnown RBP9.05□□□□□ -0.96
UBR4-202ENST00000375224 LEKR1Q6ZMV7 388 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 ACRBPQ8NEB7 543 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 PPM1EQ8WY54 764 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 KIAA1683Q9H0B3 1180 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 MRFAP1Q9Y605 127 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 CALUO43852 315 aaPredicted RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 GAS7O60861 476 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 PSMD10O75832 226 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 USP8P40818 1118 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 PRELPP51888 382 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 USP14P54578 494 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 PABPC4Q13310 644 aaKnown RBP eCLIP9.04□□□□□ -0.968e-9■■■□□ 15.7
UBR4-202ENST00000375224 ARSHQ5FYA8 562 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 DCAF15Q66K64 600 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 OTOP1Q7RTM1 612 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 NEK9Q8TD19 979 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 CHP1Q99653 195 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 ZHX3Q9H4I2 956 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 CTDP1Q9Y5B0 961 aaPredicted RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 EIF3CLB5ME19 914 aaKnown RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 NIPA1Q7RTP0 329 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 SRLQ86TD4 932 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 ZC3H3Q8IXZ2 948 aaKnown RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 CEP112Q8N8E3 955 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 SCFD1Q8WVM8 642 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 ITFG2Q969R8 447 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 EEF2KMTQ96G04 330 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 EIF3CQ99613 913 aaKnown RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 TANGO6Q9C0B7 1094 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 ARGLU1Q9NWB6 273 aaPredicted RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 KCND2Q9NZV8 630 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 SIK3Q9Y2K2 1263 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 SRCAPQ6ZRS2 3230 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 MEIS1O00470 390 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 KRT86O43790 486 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 MAGEA9P43362 315 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 HSD17B4P51659 736 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 EPHA7Q15375 998 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 ELF2Q15723 593 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 WDR59Q6PJI9 974 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 NACC1Q96RE7 527 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 UIMC1Q96RL1 719 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 RIT2Q99578 217 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 NAPGQ99747 312 aaPredicted RBP9.04□□□□□ -0.96
UBR4-202ENST00000375224 HSD17B14Q9BPX1 270 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 CARD6Q9BX69 1037 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 KCTD10Q9H3F6 313 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 MMRN2Q9H8L6 949 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
UBR4-202ENST00000375224 PDXKO00764 312 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 ZBTB7AO95365 584 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 BCRP11274 1271 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 RPL13P26373 211 aaKnown RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 GHRHRQ02643 423 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 ADAM9Q13443 819 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 SPA17Q15506 151 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 STXBP4Q6ZWJ1 553 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 KIAA1328Q86T90 577 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CYP2W1Q8TAV3 490 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CCDC42Q96M95 316 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 REEP2Q9BRK0 252 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 ZNF577Q9BSK1 485 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TSGA10Q9BZW7 698 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 BHMT2Q9H2M3 363 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 NHEJ1Q9H9Q4 299 aaPredicted RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 ST7Q9NRC1 585 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TBC1D7Q9P0N9 293 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 PLAGL2Q9UPG8 496 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TRAF3IP3Q9Y228 551 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CD2APQ9Y5K6 639 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 LOXHD1Q8IVV2 1947 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 NPHP3-ACAD11A0A0J9YXS1 232 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 RASSF10A6NK89 507 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TADA3O75528 432 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 PSMC6P62333 389 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 KNOP1Q1ED39 458 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms