RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 PIK3R2O00459 728 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 GADD45BO75293 160 aaPredicted RBP8.98□□□□□ -0.97
HSPG2-203ENST00000374695 ARL4CP56559 192 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 TMEM259Q4ZIN3 620 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 NRBP2Q9NSY0 501 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 ABCC2Q92887 1545 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 KRT87PA6NCN2 255 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 CIITAP33076 1130 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 ASPRV1Q53RT3 343 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 PLEKHA4Q9H4M7 779 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 SERTAD1Q9UHV2 236 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 RAPGEF3O95398 923 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 HSPA1AP0DMV8 641 aaKnown RBP8.98□□□□□ -0.97
HSPG2-203ENST00000374695 HSPA1BP0DMV9 641 aaKnown RBP8.98□□□□□ -0.97
HSPG2-203ENST00000374695 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 CARMIL3Q8ND23 1372 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 SNX2O60749 519 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 SERPINB4P48594 390 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 EIF6P56537 245 aaKnown RBP8.98□□□□□ -0.97
HSPG2-203ENST00000374695 PTK2BQ14289 1009 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 CEP55Q53EZ4 464 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 CFAP36Q96G28 342 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 UBE4BO95155 1302 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 KRT16P08779 473 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 KCNJ6P48051 423 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 CAPRIN1Q14444 709 aaKnown RBP8.98□□□□□ -0.97
HSPG2-203ENST00000374695 TTC8Q8TAM2 541 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 MAGEB5Q9BZ81 275 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 LMCD1Q9NZU5 365 aa8.98□□□□□ -0.97
HSPG2-203ENST00000374695 CYP4F22Q6NT55 531 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 TDRD7Q8NHU6 1098 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 CDHR1Q96JP9 859 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 NT5C2P49902 561 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 BASP1P80723 227 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 STXBP3O00186 592 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 HSPA4LO95757 839 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 EIF4A2Q14240 407 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 ARHGAP31Q2M1Z3 1444 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 ZNF532Q9HCE3 1301 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 CDH2P19022 906 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 PSMC1P62191 440 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 FAM26FQ5R3K3 315 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 HIBCHQ6NVY1 386 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 RHOT2Q8IXI1 618 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 BSDC1Q9NW68 430 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 KCNJ14Q9UNX9 436 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 LRRC63Q05C16 580 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 GRM1Q13255 1194 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 SMCR8Q8TEV9 937 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■■■■ 69.4
HSPG2-203ENST00000374695 CDC42BPBQ9Y5S2 1711 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 NSMFQ6X4W1 530 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 PKD2L2Q9NZM6 624 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 TRAF3IP3Q9Y228 551 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 KRT75O95678 551 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 ZBED1O96006 694 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 KRT1P04264 644 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 PSMA3P25788 255 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 SYMPKQ92797 1274 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 HNRNPCP07910 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 NR2F2P24468 414 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 DEFA1P59665 94 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 DEFA3P59666 94 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 CLEC17AQ6ZS10 378 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 NPC1L1Q9UHC9 1359 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 RIMBP2O15034 1052 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 PFKFB2O60825 505 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 PLTPP55058 493 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 MYO1DO94832 1006 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 BTBD6Q96KE9 485 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 EML4Q9HC35 981 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 RWDD2AQ9UIY3 292 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 LRRIQ4A6NIV6 560 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 ANXA13P27216 316 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 TMPRSS15P98073 1019 aa8.97□□□□□ -0.97
HSPG2-203ENST00000374695 MRPS26Q9BYN8 205 aaKnown RBP8.97□□□□□ -0.97
HSPG2-203ENST00000374695 CFLARO15519 480 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 THAP9Q9H5L6 903 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.96□□□□□ -0.97
HSPG2-203ENST00000374695 ITM2BQ9Y287 266 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 ASAP2O43150 1006 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 PNMA6AP0CW24 399 aaPredicted RBP8.96□□□□□ -0.97
HSPG2-203ENST00000374695 KRR1Q13601 381 aaKnown RBP8.96□□□□□ -0.97
HSPG2-203ENST00000374695 CNGA3Q16281 694 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.97
HSPG2-203ENST00000374695 TNNQ9UQP3 1299 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 CPA1P15085 419 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 DPP8Q6V1X1 898 aaPredicted RBP8.96□□□□□ -0.97
HSPG2-203ENST00000374695 COPEO14579 308 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 EFTUD2Q15029 972 aaKnown RBP eCLIP8.96□□□□□ -0.978e-7■■■■■ 26.8
HSPG2-203ENST00000374695 ZNF658Q5TYW1 1059 aaPredicted RBP8.96□□□□□ -0.97
HSPG2-203ENST00000374695 ATP11BQ9Y2G3 1177 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 YY1P25490 414 aa8.96□□□□□ -0.97
HSPG2-203ENST00000374695 HSPA2P54652 639 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms