RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LDHAP00338 332 aaKnown RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ENDOUP21128 410 aaKnown RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 TUBA1BP68363 451 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ATP2B2Q01814 1243 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ERFEQ4G0M1 354 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 MIS18BP1Q6P0N0 1132 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 NCCRP1Q6ZVX7 275 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 TUBA1AQ71U36 451 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 KRT77Q7Z794 578 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 GALNT15Q8N3T1 639 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 MAGEC3Q8TD91 643 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 SDR42E1Q8WUS8 393 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 TEKT4Q8WW24 435 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 LRRC45Q96CN5 670 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ZKSCAN3Q9BRR0 538 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 GBP3Q9H0R5 595 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 MRPL46Q9H2W6 279 aaKnown RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ZWILCHQ9H900 591 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 LZTFL1Q9NQ48 299 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 KIAA1522Q9P206 1035 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 NARFQ9UHQ1 456 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 CORO1CQ9ULV4 474 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 PHF24Q9UPV7 400 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 CTAGE9A4FU28 777 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 MINDY4BA8MYZ0 360 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 PHEXP78562 749 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 RBL2Q08999 1139 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 CBX3Q13185 183 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 MTF1Q14872 753 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 NUGGCQ68CJ6 796 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 RAD9BQ6WBX8 426 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 HVCN1Q96D96 273 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 HOOK2Q96ED9 719 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 YIPF3Q9GZM5 350 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 CUEDC2Q9H467 287 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 SLC45A1Q9Y2W3 748 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 FOCADQ5VW36 1801 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 M0R2N6 131 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 TROVE2P10155 538 aaKnown RBP eCLIP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 HSPA8P11142 646 aaKnown RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 IDO1P14902 403 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 PPP1R2P41236 205 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 GYG1P46976 350 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ZBTB17Q13105 803 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 INAQ16352 499 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 GRAMD1CQ8IYS0 662 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 TTC39CQ8N584 583 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 OXCT2Q9BYC2 517 aaPredicted RBP8.98□□□□□ -0.97
GARNL3-201ENST00000373386 ANKZF1Q9H8Y5 726 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 VPS54Q9P1Q0 977 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 BTAF1O14981 1849 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 H3BQF6 201 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 NDUFAB1O14561 156 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 TCF3P15923 654 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 CD53P19397 219 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 HIBADHP31937 336 aaKnown RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 RPS8P62241 208 aaKnown RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 GSTO1P78417 241 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 WHAMMP3Q1A5X7 153 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 BEND6Q5SZJ8 279 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 C4orf32Q8N8J7 132 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 GSDMBQ8TAX9 411 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 RNPC3Q96LT9 517 aaKnown RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 SLC39A2Q9NP94 309 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 A0A087X0B3 334 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 SNAP23O00161 211 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 LIN7AO14910 233 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 TEX33O43247 280 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 PLEKHA8P1O95397 391 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 OXCT1P55809 520 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 GRM4Q14833 912 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 ZNF569Q5MCW4 686 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 CCDC122Q5T0U0 273 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 ZNF658Q5TYW1 1059 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 BPHLQ86WA6 291 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 TMTC1Q8IUR5 882 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 SRBD1Q8N5C6 995 aaKnown RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 CCDC148Q8NFR7 591 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 NOC3LQ8WTT2 800 aaKnown RBP8.97□□□□□ -0.97
GARNL3-201ENST00000373386 MAML3Q96JK9 1138 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 CDK5RAP2Q96SN8 1893 aa8.97□□□□□ -0.97
GARNL3-201ENST00000373386 MGEA5O60502 916 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 RPS6KA4O75676 772 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 CYP1A2P05177 515 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 BCRP11274 1271 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 GNAT1P11488 350 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 SUZ12Q15022 739 aaKnown RBP8.96□□□□□ -0.97
GARNL3-201ENST00000373386 LMBRD2Q68DH5 695 aaPredicted RBP8.96□□□□□ -0.97
GARNL3-201ENST00000373386 LINC00116Q8NCU8 138 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 ZFPM2Q8WW38 1151 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 IQCDQ96DY2 449 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 NLRP3Q96P20 1036 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 NAPGQ99747 312 aaPredicted RBP8.96□□□□□ -0.97
GARNL3-201ENST00000373386 ZSWIM4Q9H7M6 989 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 SFMBT1Q9UHJ3 866 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms