RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 FLAD1Q8NFF5 587 aa21.02■□□□□ 0.96
TMEM53-202ENST00000372237 CCDC17Q96LX7 622 aa21.02■□□□□ 0.96
TMEM53-202ENST00000372237 PACSIN1Q9BY11 444 aa21.02■□□□□ 0.96
TMEM53-202ENST00000372237 PACSIN2Q9UNF0 486 aaPredicted RBP21.02■□□□□ 0.96
TMEM53-202ENST00000372237 GREB1LQ9C091 1923 aaPredicted RBP21.02■□□□□ 0.95
TMEM53-202ENST00000372237 CYP3A7-CYP3A51PA0A087WV96 503 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 HEXIM1O94992 359 aaKnown RBP21.01■□□□□ 0.95
TMEM53-202ENST00000372237 GLI1P08151 1106 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 CYP3A7P24462 503 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 CATSPER3Q86XQ3 398 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 HDAC9Q9UKV0 1011 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 GRID2IPA4D2P6 1211 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 MMP10P09238 476 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 CASP5P51878 434 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 NFIAQ12857 509 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 SKIDA1Q1XH10 827 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 EPB41L5Q9HCM4 733 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 LRRC37AA6NMS7 1700 aa21.01■□□□□ 0.95
TMEM53-202ENST00000372237 QSER1Q2KHR3 1735 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 GUCY2DQ02846 1103 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 NNTQ13423 1086 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 PRR16Q569H4 304 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 ERMNQ8TAM6 284 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 TEKT1Q969V4 418 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 MBOAT7Q96N66 472 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 SPAG5Q96R06 1193 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 CAPS2Q9BXY5 557 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 GDF3Q9NR23 364 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 NFU1Q9UMS0 254 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 EEF2P13639 858 aaKnown RBP21■□□□□ 0.95
TMEM53-202ENST00000372237 CARSP49589 748 aaKnown RBP21■□□□□ 0.95
TMEM53-202ENST00000372237 ARHGAP4P98171 946 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 PABPC4Q13310 644 aaKnown RBP eCLIP21■□□□□ 0.95
TMEM53-202ENST00000372237 AP3B2Q13367 1082 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 GIT2Q14161 759 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 DOK7Q18PE1 504 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 MOXD1Q6UVY6 613 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 GBP6Q6ZN66 633 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 ARMCX3Q9UH62 379 aaPredicted RBP21■□□□□ 0.95
TMEM53-202ENST00000372237 DNM3Q9UQ16 869 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 TRAF3IP3Q9Y228 551 aa21■□□□□ 0.95
TMEM53-202ENST00000372237 ZSCAN5CA6NGD5 496 aaPredicted RBP20.99■□□□□ 0.95
TMEM53-202ENST00000372237 MEIS1O00470 390 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 MEIS2O14770 477 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 EPB41P11171 864 aaKnown RBP20.99■□□□□ 0.95
TMEM53-202ENST00000372237 ACTN1P12814 892 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 IRAK1P51617 712 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 PSMC6P62333 389 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 PTK2Q05397 1052 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 SPIRE1Q08AE8 756 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 KNOP1Q1ED39 458 aaKnown RBP20.99■□□□□ 0.95
TMEM53-202ENST00000372237 APOBEC3HQ6NTF7 200 aaKnown RBP20.99■□□□□ 0.95
TMEM53-202ENST00000372237 HHIPL2Q6UWX4 724 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 IFT81Q8WYA0 676 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 KRT12Q99456 494 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 EHD4Q9H223 541 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 ADAMTSL1Q8N6G6 1762 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 ESYT3A0FGR9 886 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 NPR1P16066 1061 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 SLC9A1P19634 815 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 RNASE9P60153 205 aaKnown RBP20.99■□□□□ 0.95
TMEM53-202ENST00000372237 PAK2Q13177 524 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 SLFN13Q68D06 897 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 FRMD5Q7Z6J6 570 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 ETNPPLQ8TBG4 499 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 DCAF4Q8WV16 495 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 INPP4AQ96PE3 977 aaPredicted RBP20.99■□□□□ 0.95
TMEM53-202ENST00000372237 ZIM3Q96PE6 472 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 DNAJC18Q9H819 358 aa20.99■□□□□ 0.95
TMEM53-202ENST00000372237 FAM196BA6NMK8 535 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 AFPP02771 609 aaKnown RBP20.98■□□□□ 0.95
TMEM53-202ENST00000372237 UCHL3P15374 230 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 DNAJC21Q5F1R6 531 aaKnown RBP20.98■□□□□ 0.95
TMEM53-202ENST00000372237 C10orf76Q5T2E6 689 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 SFR1Q86XK3 245 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 ZFPM1Q8IX07 1006 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 REEP2Q9BRK0 252 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 G3V3G9 751 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 XRCC5P13010 732 aaKnown RBP20.98■□□□□ 0.95
TMEM53-202ENST00000372237 RPA1P27694 616 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 EXOC3L4Q17RC7 722 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 TTMPQ5BVD1 217 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 DCAF8Q5TAQ9 597 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 SYT2Q8N9I0 419 aaPredicted RBP20.98■□□□□ 0.95
TMEM53-202ENST00000372237 TAF4BQ92750 862 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 ARL8AQ96BM9 186 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 PLCB1Q9NQ66 1216 aa20.98■□□□□ 0.95
TMEM53-202ENST00000372237 IRF2BP2Q7Z5L9 587 aa20.97■□□□□ 0.95
TMEM53-202ENST00000372237 CRYGNQ8WXF5 182 aa20.97■□□□□ 0.95
TMEM53-202ENST00000372237 CCDC43Q96MW1 224 aaKnown RBP20.97■□□□□ 0.95
TMEM53-202ENST00000372237 BZW2Q9Y6E2 419 aaKnown RBP20.97■□□□□ 0.95
TMEM53-202ENST00000372237 BTNL10A8MVZ5 291 aa20.96■□□□□ 0.95
TMEM53-202ENST00000372237 TBX3O15119 743 aa20.96■□□□□ 0.95
TMEM53-202ENST00000372237 CALUO43852 315 aaPredicted RBP20.96■□□□□ 0.95
TMEM53-202ENST00000372237 FAM153BP0C7A2 387 aa20.96■□□□□ 0.95
TMEM53-202ENST00000372237 PDE6BP35913 854 aa20.96■□□□□ 0.95
TMEM53-202ENST00000372237 TCP10Q12799 353 aa20.96■□□□□ 0.95
TMEM53-202ENST00000372237 SHROOM1Q2M3G4 852 aaPredicted RBP20.96■□□□□ 0.95
TMEM53-202ENST00000372237 FAM153CQ494X1 144 aa20.96■□□□□ 0.95
TMEM53-202ENST00000372237 CERKLQ49MI3 558 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms