RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 PDIA6Q15084 440 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 RINT1Q6NUQ1 792 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CCHCR1Q8TD31 782 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 ADGRB1O14514 1584 aa12.83□□□□□ -0.35
DEPDC1-201ENST00000370966 SUN1O94901 812 aa12.83□□□□□ -0.35
DEPDC1-201ENST00000370966 USP11P51784 963 aa12.83□□□□□ -0.35
DEPDC1-201ENST00000370966 MIF4GDA9UHW6 222 aaKnown RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 CRCPO75575 148 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 CIAPIN1Q6FI81 312 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 SLFN12LQ6IEE8 588 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 RILPQ96NA2 401 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 JAK3P52333 1124 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 KAZNQ674X7 775 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 CALR3Q96L12 384 aaKnown RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 RAB3IPQ96QF0 476 aaPredicted RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 BCAP29Q9UHQ4 241 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 TEX33O43247 280 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 NR3C1P04150 777 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 EIF2AK2P19525 551 aaKnown RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 IL9RQ01113 521 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 COASYQ13057 564 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 PDIA5Q14554 519 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 SFR1Q86XK3 245 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 SRBD1Q8N5C6 995 aaKnown RBP12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 MCPH1Q8NEM0 835 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 KCNB2Q92953 911 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 FMO2Q99518 471 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 VCX3BQ9H321 246 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
DEPDC1-201ENST00000370966 PIK3C2BO00750 1634 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 SORBS3O60504 671 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 GUCY1A2P33402 732 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 KCNH2Q12809 1159 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 PPP4R1Q8TF05 950 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 PTPN22Q9Y2R2 807 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 USP17L10C9JJH3 530 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 H7C0C1 242 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 ATP5OP48047 213 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 PRELPP51888 382 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 PDXDC2PQ6P474 469 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 CCDC197Q8NCU1 140 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 ZC3H13Q5T200 1668 aaKnown RBP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 F5H6K3 240 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 K7ERI5 159 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 TLR3O15455 904 aaKnown RBP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 KLRC3Q07444 240 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 QRICH1Q2TAL8 776 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 SLC27A3Q5K4L6 730 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 LRRC8CQ8TDW0 803 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 IL25Q9H293 177 aa12.82□□□□□ -0.36
DEPDC1-201ENST00000370966 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 E9PMD0 336 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 MED7O43513 233 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 LDHAP00338 332 aaKnown RBP12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 SF3A3Q12874 501 aaKnown RBP eCLIP12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 SP8Q8IXZ3 490 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 CDKL2Q92772 493 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 DNAJC12Q9UKB3 198 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 FOXN1O15353 648 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 HIP1RO75146 1068 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 LIG3P49916 1009 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 NNTQ13423 1086 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 CC2D1AQ6P1N0 951 aaPredicted RBP12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 NACA2Q9H009 215 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 TTLL3Q9Y4R7 772 aa12.81□□□□□ -0.36
DEPDC1-201ENST00000370966 CLTCQ00610 1675 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms