RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CALCOCO2Q13137 446 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PAK2Q13177 524 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 SMC1AQ14683 1233 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ZSCAN26Q16670 478 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CFAP58Q5T655 872 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PPP1R2P3Q6NXS1 205 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 POTEGQ6S5H5 508 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 POTEEQ6S8J3 1075 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CEP128Q6ZU80 1094 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 INTS8Q75QN2 995 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM83AQ86UY5 434 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 MICALL2Q8IY33 904 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 SAMD3Q8N6K7 520 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 DYDC1Q8WWB3 177 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 IFT81Q8WYA0 676 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 MYOZ2Q9NPC6 264 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 GCNT4Q9P109 453 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PNMA3Q9UL41 463 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 TRPC6Q9Y210 931 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ZBTB12Q9Y330 459 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PITPNM2Q9BZ72 1349 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 LRP6O75581 1613 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ATP2A1O14983 1001 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CLIC2O15247 247 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CTNND1O60716 968 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 NPM3O75607 178 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 NR3C1P04150 777 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 SHMT1P34896 483 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 NR1I3Q14994 352 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 STXBP2Q15833 593 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 TKFCQ3LXA3 575 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 DACT2Q5SW24 774 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 FKBP1CQ5VVH2 108 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 SNRNP48Q6IEG0 339 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PADI6Q6TGC4 694 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 MICALCLQ6ZW33 695 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC50Q8IVM0 306 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PIGOQ8TEQ8 1089 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 LRRC45Q96CN5 670 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 DYDC2Q96IM9 177 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PRMT6Q96LA8 375 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ACAD9Q9H845 621 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 BCCIPQ9P287 314 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 JRKLQ9Y4A0 524 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 MORC2Q9Y6X9 1032 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PDXKO00764 312 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 TEX33O43247 280 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ATP8B1O43520 1251 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 NEBLO76041 1014 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 RPA1P27694 616 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 EIF4A3P38919 411 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PDE6CP51160 858 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 KIF11P52732 1056 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PSMC5P62195 406 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PTPN21Q16825 1174 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 TTC31Q49AM3 519 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 XRRA1Q6P2D8 792 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PPM1KQ8N3J5 372 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ACRBPQ8NEB7 543 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ANKRD7Q92527 254 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC127Q96BQ5 260 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ODF2LQ9ULJ1 636 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 UTP11Q9Y3A2 253 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 A6NNZ2 444 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CAP2P40123 477 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 TUBB8Q3ZCM7 444 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 ANKRD40Q6AI12 368 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 SLFN12LQ6IEE8 588 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 APOBEC3HQ6NTF7 200 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CROCCP2Q86T23 111 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 DAAM2Q86T65 1068 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 DPF2Q92785 391 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM167AQ96KS9 214 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PSMD1Q99460 953 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 RIT2Q99578 217 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC113Q9H0I3 377 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 RPAP3Q9H6T3 665 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 KBTBD4Q9NVX7 518 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 MAP3K20Q9NYL2 800 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 FEZ2Q9UHY8 353 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 CAPN11Q9UMQ6 739 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 WTIPA6NIX2 430 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TNNC2P02585 160 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MYCNP04198 464 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 FCER1AP12319 257 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 MXI1P50539 228 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 CCZ1BP86790 482 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 CCZ1P86791 482 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 RASSF7Q02833 373 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 COG2Q14746 738 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 PPP1R7Q15435 360 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 EDRF1Q3B7T1 1238 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 NT5DC1Q5TFE4 455 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 PDXDC2PQ6P474 469 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 FRMD5Q7Z6J6 570 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 LXNQ9BS40 222 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 KIAA1586Q9HCI6 787 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 TMX2Q9Y320 296 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 DAAM1Q9Y4D1 1078 aa5.79□□□□□ -1.48
SMNDC1-202ENST00000369603 ADGRG1Q9Y653 693 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms